Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 156 4e-33
seq13747 120 3e-22
>seq13746
Length=16180835
Score = 156 bits (172), Expect = 4e-33
Identities = 555/849 (65%), Gaps = 35/849 (4%)
Strand=Plus/Plus
Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173
||||| || ||||| | ||| || || || || || | ||| |||||||| || |||||
Sbjct 14158243 ACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCCGGTTTTA 14158302
Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTT--ATAGGTTGGATTGG 147231
| ||| || ||| || ||| |||||||||| | |||| |||| |||| | |
Sbjct 14158303 AGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAG--CTTTCCATAGTTTGGCTCTG 14158360
Query 147232 CCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATGT 147291
||||| | ||||| || ||||||||||| || | | || || || |||||||| |
Sbjct 14158361 CCACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGGCCATTT 14158420
Query 147292 CCAACACTACTTTTTGTTTAATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTGTG 147351
| | ||| | |||||||| | || ||| | || | | || || |
Sbjct 14158421 TAATGGTTGATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCGAACCTTTTGGG 14158480
Query 147352 GAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAAT---TTTTATCATGATAT 147408
|||| ||||||||||| | |||||| || | || || || ||||| ||
Sbjct 14158481 GAATGGATTCAATATTTTGAATAGATCCCCTGCTGGAGATTATCTGATTCTTCATGTCAT 14158540
Query 147409 CTGTCGAATATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTTGAT 147468
| ||| | | | | | | | ||| || | | ||| || || ||||||||
Sbjct 14158541 C-GTCCCACAAATCCAGCT-CCGTCAAGTCCCTC-AGCAAATGATGGTTAACCACTTGGA 14158597
Query 147469 ACTCGCCCGACAGAACTCTTC--GTACGTACAAATTACTAGTAAACGGCTCGAACGACTC 147526
|||| || || || || | || ||| || | ||| | || | |||||||| |||||
Sbjct 14158598 ACTCCCCGGAGAGTACGCGTCTGGTA--TAAATATTTGTTGTGTAGGGCTCGAAGGACTC 14158655
Query 147527 GTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATT 147586
||||||||| | |||||| ||||||| ||| || ||||| ||||| ||||| || ||
Sbjct 14158656 GTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAGTT 14158715
Query 147587 GCGTAAGCCGTGC------ATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATC 147640
| | || ||| |||| | || ||| || | ||||| ||| ||| |
Sbjct 14158716 TCTGACTCCATGCTGTTTGATAGAC---TC---CTTCAGAGATTTCCAGTCCCAGAGACC 14158769
Query 147641 ATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCC 147700
| ||| | | ||| ||||| || |||| | || ||| |||| | ||||||||
Sbjct 14158770 AGTCG---GCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCC 14158826
Query 147701 ATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACT-TAGTGCAC 147759
|| |||| || || ||||||| || || |||||| || | | || || || |
Sbjct 14158827 TTCATAAGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAAC-TGGCCTCCAGGGCTC 14158885
Query 147760 CATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTAGG 147819
|| | || || ||||| |||||| || || || || ||||| | ||| |||||||
Sbjct 14158886 CAAAGTAGATTGTTTCAAAAATCTGTTGGTTCAAGAGGCTTGCCTCCTCGCTTTCGTAGG 14158945
Query 147820 GCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGG 147878
| ||| | || || | || || || ||||| |||| |||||| ||||| || ||
Sbjct 14158946 G-ATAACGCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGA 14159004
Query 147879 TGTCTGAAATTCGA-TGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTT 147937
|| || | ||| || | |||| || | || ||||||||| || | || || || ||
Sbjct 14159005 TGCCTCATATTGGACTTCTTG-GCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTT 14159063
Query 147938 ATTGAGATT 147946
|||||| ||
Sbjct 14159064 ATTGAGGTT 14159072
Score = 89.7 bits (98), Expect = 5e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| |||||||| | |||||| |||||| ||||||||||| || ||||| |||||
Sbjct 14254278 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 14254337
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | || || | || ||||| || || ||||||| | | | | || |||||||||
Sbjct 14254338 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTATAAC 14254397
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| || || ||||| | || |||| ||| | ||| | || ||
Sbjct 14254398 ATTCAGAAGGAGTCTACCTTGCACTTGGTGCTGCGCCTTCGTGGTGG 14254444
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| | || || || | |||||| |||| | || |
Sbjct 2087867 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCGTCG 2087926
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||||||| | || || ||||| |||||||| || || ||||| |||||
Sbjct 2087927 GACACCATCGAGAATGTGAAGGCTAAGATCCAGGACAAAGAGGGCATCCCTCCAGATCAG 2087986
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | || || | || |||||| || || || |||| | | | | | |||||| |||
Sbjct 2087987 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTTTCCGACTACAAC 2088046
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| || || || || ||| | |||||||| ||
Sbjct 2088047 ATCCAGAAGGAGTCGACTCTGCATCTGGTGCT 2088078
>seq13747
Length=19884421
Score = 120 bits (132), Expect = 3e-22
Identities = 146/198 (74%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 71678 GATGAACTATGGAATGCTGCTCA---GCGACAGCTACGCAATGAGGGTAAAATTCACGGA 71734
|| || || |||||| | || || || || | |||| |||||| || || |||||
Sbjct 16052051 GACGACCTGTGGAATTCGGCCCAATTGCAACTGGTACG---TGAGGGCAAGATGCACGGC 16052107
Query 71735 TACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAGGCG 71794
| ||| |||||||||||||| || ||||| ||||| ||||| | ||||||||||||||
Sbjct 16052108 TTCCTGCGCATGTACTGGGCTAAGAAGATCCTCGAATGGACAGAGACTCCCGAGCAGGCC 16052167
Query 71795 CTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAACGGT 71854
|| ||||| | ||| || || |||| ||||| || ||||| || || || || ||
Sbjct 16052168 CTAGAGTACGCCATTCTACTTAATGATAAGTACAGCCTGGACGGACGAGACCCCAATGGA 16052227
Query 71855 TATGTCGGTTGCATGTGG 71872
|| || || || ||||||
Sbjct 16052228 TACGTGGGGTGTATGTGG 16052245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478580135883280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |