Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq13746 271 2e-67 >seq13746 Length=16180835 Score = 271 bits (300), Expect = 2e-67 Identities = 1053/1636 (64%), Gaps = 49/1636 (3%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| ||||| |||||||| | | |||| || | ||| ||| |||| || Sbjct 14159906 TTCACTCACGCTTCGCCAACACTTTTTGCCGCTGCCACGAATCGTCCCCAGCTGTCGTCC 14159847 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 || || || || | |||| | ||| ||||||||||||||||| | | || || | Sbjct 14159846 TGTTTCCTCCTGACCATGACTGCCGACTCCATCGAGGGTATCTTCAAATCGGTTGAGCAA 14159787 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 || || | || |||||| ||| || || |||||| | | || |||| ||||||| Sbjct 14159786 TGCGCCATGATCTCCAAGTCTGCTGGTGGTATTGGTCTTAACG-TCCATTGCATTCGTGC 14159728 Query 363726 ACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 | || | | ||| |||| || | || | | || ||||| |||||||| ||||| Sbjct 14159727 AAAGGGTACCTCGATTTGCGGAACGAATGGCACA-TCCAATGGCCTGGTTCCTATGCTGA 14159669 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | || ||| |||| ||| |||| || || |||||||| || ||||| || || | Sbjct 14159668 GAGTCTTTAACAACGTGGCGCGGTATGTGGATCAGGGTGGTGGCAAGCGGCCGGGAGCCT 14159609 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || ||||| ||||| ||| | ||| | ||||||||||| || || ||| | Sbjct 14159608 TTGCCATTTATCTGGAGCCCTGGCATTCGGATGTATTTGAGTTTCTGGACCTTAAGAAGA 14159549 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 | || || || || || || || || ||| |||||||||| || ||| | | || | Sbjct 14159548 ATACTGGCAAGGAAGAGCATCGAGCCCGCGATTTGTTCTATGCCCTGTGGATACCAGATC 14159489 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || ||||| || |||||||| | || | ||||| | | || || || |||| | Sbjct 14159488 TCTTCATGAAACGAGTGGAGGCCAATGAGGACTGGTCGTTAATGTGTCCCCATAAATGCC 14159429 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATG--TTGCTCTATACGAAAAGTATGAATC 364082 | || || ||||| ||||| || || | || |||||| |||| || ||| Sbjct 14159428 CTGGCCTCCATGATGTGTGGGGCGATGAGTTTGAAAAACTCTATGTGAAA--TACGAACA 14159371 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 ||||||| || | || | |||||| | |||||||| ||||| || || Sbjct 14159370 GGAGGGACGCGCCAATCGAACTGTGAAAGCACAGTCCTTGTGGTTTGCTATCATTGAGTC 14159311 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 ||| | ||||| |||| || || ||| ||| ||| || | |||||||| ||| ||| Sbjct 14159310 GCAAGTGGAGACTGGAAATCCTTACATGCTGTTCAAGGACGCCTGCAACCGAAAGAGCAA 14159251 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262 ||| ||| | | || || ||| || ||||| || || || || ||| |||| || | Sbjct 14159250 CCAACAGAATGTGGGCACCATTAAGTGCAGCAATCTGTGCACGGAAATTGTTGAGTATTC 14159191 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA- 364321 | || ||||||| ||| || || || | || || ||||| || |||||| | Sbjct 14159190 TTCACCTGACGAGATTGCAGTTTGCAATTTGGCCTCCATCGCTCTCAACATGTTTGTGAC 14159131 Query 364322 ----AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGC 364377 ||| | || | |||| | | | || | || || || | | | | Sbjct 14159130 TCCCGAGAAG--ACATATGACTTCAAAAAGCTAAAGGAGGTCACAAAGACGGTGGCCAGA 14159073 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAAT 364437 || ||| | ||| | || || | || | |||||| | || || ||| || || ||| Sbjct 14159072 AACCTCAATAAGATAATAGATATCAACTTTTATCCGCTGCCGGAGGCCAAGAAGTCCAAT 14159013 Query 364438 ATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACG------TTTTTATG 364491 ||| | ||||| || || || | ||||| ||||| || ||||||| || ||||| Sbjct 14159012 ATGAGGCATCGTCCTATCGGAATCGGTGTTCAGGGACTGGCTGACGCGCTGATTCTTATG 14158953 Query 364492 ----ATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 || | | || || || || || | | | || | |||| || Sbjct 14158952 CGTTATCCCTACGAAAGC----GA------GGAGGCAAGCCTCTTGAACCAACAGATTTT 14158903 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 ||||||||| || |||| || || || || || |||| ||| | |||| Sbjct 14158902 TGAAACAATCTACTTTGGAGCCCTGGAGGCCAGTTGCGAACTGGCCCAAAAAGACGGAAC 14158843 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAA 364667 || |||||||| || ||| | |||||| | |||| || | ||| | Sbjct 14158842 TTATGAAACTTATGAAGGAAGCCCAGTAAGTAAGGGAATTCTGCAGTACGACATGTGGGA 14158783 Query 364668 TGTCACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCAT 364725 | ||||| ||| | ||| ||||| | | || | | | | | || ||||| Sbjct 14158782 TAAAACGCCGACTGGTCTCTGGGACTGGAAATCTCTGAAGGAGTCTA--TCAAACAGCAT 14158725 Query 364726 GGTACTC-GCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 || | || | |||||||| | || || |||||||| || || ||||| ||||| | Sbjct 14158724 GG-AGTCAGAAACTCCCTATTGGTTGCTCCGATGCCCACAGCATCGACTGCTCAGATTAT 14158666 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || |||||||||| |||||| || | |||| ||| ||||| | | || || || || Sbjct 14158665 GGGTAACAACGAGTCCTTCGAGCCCTACACAACAAATATTTATACCAGACGCGTACTCTC 14158606 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 ||| || || | || ||||| | | | | | ||| | | || | | |||| Sbjct 14158605 CGGGGAGTTCCAAGTGGTTAACCATCATTTGCTGAGGGACTTGACGGAGCTGGATTTGTG 14158546 Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCA-G 364963 || || ||||||||| | || ||| || | || ||| | || || ||| | Sbjct 14158545 GGACGATGACATGAAGAATCAGATAATCTCCAGCAGGGGATCTATTCAAAATATTGAATC 14158486 Query 364964 GATT-TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACT 365022 ||| ||| ||| | | || |||||||||| ||||||||||| || || | | Sbjct 14158485 CATTCCCCAAAAGGTTCGCGACC--TTTACAAAACAGTATGGGAAATCTCAGTGAAATCA 14158428 Query 365023 CTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTA 365082 |||| | ||||| || ||||||||||| ||||| |||||||||||| || || || Sbjct 14158427 ACCATTAAAATGGCCGCTGATCGCGGTGCGTTTATAGATCAGAGCCAGTCCTTCAA--TA 14158370 Query 365083 TTCA--TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAAT 365140 | || || | |||||| || | ||||| |||||||| ||||||||| |||||| Sbjct 14158369 TCCATGTGGCAGAGCCAAACTATGGAAAGCTCACATCCATTCATTTCTACTCCTGGAAAG 14158310 Query 365141 CCGGTCTTAAGACAGG 365156 | |||||||| || || Sbjct 14158309 CTGGTCTTAAAACCGG 14158294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303124002451718