Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq13748 91.5 1e-13 seq13746 91.5 1e-13 >seq13748 Length=23293914 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || ||||| || || || ||||| | || ||| | ||||| ||| || Sbjct 9537222 AATGCAGATCTTCGTAAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9537281 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||||| | || || ||||| ||||| || || || || || || || Sbjct 9537282 CGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 9537341 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || |||| | || ||| ||||| ||||| |||| | | | | | || || || Sbjct 9537342 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCGGACTACAA 9537401 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| || || ||||| || |||| || || Sbjct 9537402 CATCCAGAAGGAATCCACCCTTCACTTGGT 9537431 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || ||||| || || || ||||| | || ||| | ||||| ||| || Sbjct 9538590 AATGCAGATCTTCGTAAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9538649 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||||| | || || |||||| ||||| || || || || || || || Sbjct 9538650 CGACACCATCGAGAACGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCAGACCA 9538709 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||| | || ||| ||||| ||||| |||| | | | | | || || || Sbjct 9538710 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCGGACTACAA 9538769 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 ||| || || || || || | ||||| ||| | | || | |||||| | ||| Sbjct 9538770 CATCCAGAAGGAGTCGACTCTCCATTTGGTGCTCCGTCTGCGCGGAGGAATCTAA 9538824 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || || ||||| | || ||| | ||||| ||| || Sbjct 9538134 AATGCAGATCTTCGTGAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9538193 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||||| | || || ||||| ||||| || || || || || || || Sbjct 9538194 CGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 9538253 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || |||| | || ||| ||||| ||||| |||| | ||| | || || || Sbjct 9538254 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACTCTGTCGGACTACAA 9538313 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| || || ||||| || |||| || || Sbjct 9538314 CATCCAGAAGGAATCCACCCTTCACTTGGT 9538343 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || || ||||| | || ||| | ||||| ||| || Sbjct 9537450 AATGCAGATCTTCGTGAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9537509 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||||| | || || ||||| ||||| || || || || || || || Sbjct 9537510 CGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 9537569 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || |||| | || ||| ||||| ||||| |||| | ||| | || || || Sbjct 9537570 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACTCTGTCGGACTACAA 9537629 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| || || || || || |||| || || Sbjct 9537630 CATCCAGAAGGAGTCCACCCTTCACTTGGT 9537659 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || || ||||| | || ||| | ||||| ||| || Sbjct 9538362 AATGCAGATCTTCGTGAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9538421 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||||| | || || ||||| ||||| || || || || || || || Sbjct 9538422 CGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 9538481 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || |||| | || ||| ||||| ||||| |||| | ||| | || || || Sbjct 9538482 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACTCTGTCGGACTACAA 9538541 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| || || || || || |||| || || Sbjct 9538542 CATCCAGAAGGAGTCCACCCTTCACTTGGT 9538571 >seq13746 Length=16180835 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | || || || | || ||| |||| |||||| | Sbjct 2087867 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCGTCG 2087926 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||| |||||||| ||||| ||||| ||||| Sbjct 2087927 GACACCATCGAGAATGTGAAGGCTAAGATCCAGGACAAAGAGGGCATCCCTCCAGATCAG 2087986 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || || |||| | | | | ||| || ||| Sbjct 2087987 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTTTCCGACTACAAC 2088046 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || || || || | ||| | ||| Sbjct 2088047 ATCCAGAAGGAGTCGACTCTGCATCTGGTG 2088076 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | |||||| |||||| ||||||||||| || ||||| ||||| Sbjct 14254278 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 14254337 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || |||||||| || ||||||| | | | || || |||||| Sbjct 14254338 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTATAAC 14254397 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || || ||||| | || || ||| Sbjct 14254398 ATTCAGAAGGAGTCTACCTTGCACTTGGTG 14254427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429863957371095