Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq13748 91.5 1e-13
seq13746 91.5 1e-13
>seq13748
Length=23293914
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | || ||||| || || || ||||| | || ||| | ||||| ||| ||
Sbjct 9537222 AATGCAGATCTTCGTAAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9537281
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||||||||||| | || || ||||| ||||| || || || || || || ||
Sbjct 9537282 CGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 9537341
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| || |||| | || ||| ||||| ||||| |||| | | | | | || || ||
Sbjct 9537342 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCGGACTACAA 9537401
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199
||| || || ||||| || |||| || ||
Sbjct 9537402 CATCCAGAAGGAATCCACCCTTCACTTGGT 9537431
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | || ||||| || || || ||||| | || ||| | ||||| ||| ||
Sbjct 9538590 AATGCAGATCTTCGTAAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9538649
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||||||||||| | || || |||||| ||||| || || || || || || ||
Sbjct 9538650 CGACACCATCGAGAACGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCAGACCA 9538709
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| | |||| | || ||| ||||| ||||| |||| | | | | | || || ||
Sbjct 9538710 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCGGACTACAA 9538769
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224
||| || || || || || | ||||| ||| | | || | |||||| | |||
Sbjct 9538770 CATCCAGAAGGAGTCGACTCTCCATTTGGTGCTCCGTCTGCGCGGAGGAATCTAA 9538824
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | || || || || || || ||||| | || ||| | ||||| ||| ||
Sbjct 9538134 AATGCAGATCTTCGTGAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9538193
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||||||||||| | || || ||||| ||||| || || || || || || ||
Sbjct 9538194 CGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 9538253
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| || |||| | || ||| ||||| ||||| |||| | ||| | || || ||
Sbjct 9538254 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACTCTGTCGGACTACAA 9538313
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199
||| || || ||||| || |||| || ||
Sbjct 9538314 CATCCAGAAGGAATCCACCCTTCACTTGGT 9538343
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | || || || || || || ||||| | || ||| | ||||| ||| ||
Sbjct 9537450 AATGCAGATCTTCGTGAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9537509
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||||||||||| | || || ||||| ||||| || || || || || || ||
Sbjct 9537510 CGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 9537569
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| || |||| | || ||| ||||| ||||| |||| | ||| | || || ||
Sbjct 9537570 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACTCTGTCGGACTACAA 9537629
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199
||| || || || || || |||| || ||
Sbjct 9537630 CATCCAGAAGGAGTCCACCCTTCACTTGGT 9537659
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | || || || || || || ||||| | || ||| | ||||| ||| ||
Sbjct 9538362 AATGCAGATCTTCGTGAAGACCTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTC 9538421
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||||||||||| | || || ||||| ||||| || || || || || || ||
Sbjct 9538422 CGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 9538481
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| || |||| | || ||| ||||| ||||| |||| | ||| | || || ||
Sbjct 9538482 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACTCTGTCGGACTACAA 9538541
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199
||| || || || || || |||| || ||
Sbjct 9538542 CATCCAGAAGGAGTCCACCCTTCACTTGGT 9538571
>seq13746
Length=16180835
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || ||||| | || || || | || ||| |||| |||||| |
Sbjct 2087867 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCGTCG 2087926
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | || || ||||| |||||||| ||||| ||||| |||||
Sbjct 2087927 GACACCATCGAGAATGTGAAGGCTAAGATCCAGGACAAAGAGGGCATCCCTCCAGATCAG 2087986
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || ||||||||| || || |||| | | | | ||| || |||
Sbjct 2087987 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTTTCCGACTACAAC 2088046
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200
|| || || || || || | ||| | |||
Sbjct 2088047 ATCCAGAAGGAGTCGACTCTGCATCTGGTG 2088076
Score = 91.5 bits (100), Expect = 1e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| |||||||| | |||||| |||||| ||||||||||| || ||||| |||||
Sbjct 14254278 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 14254337
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || |||||||| || ||||||| | | | || || ||||||
Sbjct 14254338 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTATAAC 14254397
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200
||||| || || ||||| | || || |||
Sbjct 14254398 ATTCAGAAGGAGTCTACCTTGCACTTGGTG 14254427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429863957371095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |