Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq13746 443 3e-119 >seq13746 Length=16180835 Score = 443 bits (490), Expect = 3e-119 Identities = 1256/1909 (66%), Gaps = 32/1909 (2%) Strand=Plus/Plus Query 61840 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 61899 |||||| | || || ||||| | || || || || || || | ||||||||||| Sbjct 14158236 CTTGTCGACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCC 14158295 Query 61900 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 61959 ||||| ||||| |||| ||| ||||| || || || || ||| | || Sbjct 14158296 GGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTGG 14158355 Query 61960 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62019 ||||| | ||||||||| | || || || ||||| || || || || | || || || Sbjct 14158356 CTCTGCCACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGGC 14158415 Query 62020 CATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 62078 |||||| || | | || || |||||||| | ||||| |||| |||| || | Sbjct 14158416 CATTTTAATGGTTGATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCG-AACCT 14158474 Query 62079 CTTCTGGAA-GGTTTG--TATTCTGAATGGATCCACCATCTGCC-ATAATCCTATTCTTG 62134 || |||| || || |||| ||||| ||||| || ||| || ||| |||||| Sbjct 14158475 TTTGGGGAATGGATTCAATATTTTGAATAGATCC-CCTGCTGGAGATTATCTGATTCTTC 14158533 Query 62135 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62194 || ||||| | ||| || | ||| || || | || || | ||| | ||||| ||| Sbjct 14158534 ATGTCATCGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGGTTAACCACT 14158593 Query 62195 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 62254 || || || || || | ||| | | || |||||||| | || || || || | ||| Sbjct 14158594 TGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGAC 14158653 Query 62255 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62314 || || || |||| ||| |||||||| ||||| || ||||| || || ||||||| Sbjct 14158654 TCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAG 14158713 Query 62315 TTTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 62373 ||||| | || | |||| |||| || || |||| || ||| | ||| ||| | | Sbjct 14158714 TTTCTGACTCCATGCTGTT-TGATAGACTCCTTCAGAGATTTCCAGTCCCAGAGACCAGT 14158772 Query 62374 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATA 62433 ||| || ||||| || ||||| | |||| |||| Sbjct 14158773 CGGCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATA 14158832 Query 62434 TGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATA 62493 || || || | ||| || || | || ||||| ||||| ||||| | || || | || Sbjct 14158833 AGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTA 14158892 Query 62494 AATGGTTTCGAAGATCTTCTTATTTA-GAT-CTTGCGCTTCCAGGCTATCAAATGGATAA 62551 || ||||| || |||| | || | || ||||| ||| ||| || | |||||| Sbjct 14158893 GATTGTTTCAAAAATCTGTTGGTTCAAGAGGCTTGCC--TCCTCGCTTTCGTAGGGATAA 14158950 Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 | ||||| | |||||| || | ||| |||||||| || |||||||| | ||| ||| Sbjct 14158951 CGCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTC 14159010 Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 |||| || | | || || || | |||||| | || |||||||| || |||||||| Sbjct 14159011 ATATTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGG 14159070 Query 62672 TTTCTGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA- 62729 |||||| | | ||||| || ||||| || || || ||| || | || Sbjct 14159071 TTTCTGGCCACCGTCTTTGTG-ACCTCCTTTAGCTTTTTGAAGTCATATGTCTTCTCGGG 14159129 Query 62730 --TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 62787 | ||||||||||| | || | || |||| ||| ||||| || | ||| | || Sbjct 14159130 AGTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGA 14159189 Query 62788 CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 62847 | ||| | | || || ||||| ||||| || ||||| ||||| || | ||| ||||| Sbjct 14159190 AGAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTG 14159249 Query 62848 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTG 62907 || |||||| ||| || || ||||| | || ||| | ||| | ||||| || | || Sbjct 14159250 GTTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTG 14159309 Query 62908 AGATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCTTT 62965 || || || || || ||| | | ||| | || || | | |||| | || | Sbjct 14159310 CGACTCAATGATAGCAAACCACAAGGACT-GTGCTTTCACAGTTCGATTGGCGCGTCCCT 14159368 Query 62966 TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCA 63025 || || ||||| ||| | | ||| ||||| || ||||| |||| | || ||| Sbjct 14159369 CCTGTT-CGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCA 14159427 Query 63026 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63085 || |||| || |||||||| |||||||| || | | ||| |||||||||||| ||| Sbjct 14159428 GGGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAG 14159487 Query 63086 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 63144 ||||| || ||||| || || ||| || | ||| | || || ||| || || || || || Sbjct 14159488 AGATCTGGTATCCACAGGGC-ATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGT 14159546 Query 63145 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63204 |||||| ||||| || || ||| | | | ||| |||||||| || |||| || ||||| Sbjct 14159547 ATTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGC 14159606 Query 63205 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63264 | |||| ||||| ||| || |||||||| | || | || ||| ||| | || Sbjct 14159607 AAAGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGAC 14159666 Query 63265 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACT 63324 ||||| ||| |||| | ||||||||||| ||||| || || | || || | || | Sbjct 14159667 TCTCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTT 14159726 Query 63325 GGCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63380 |||||||| ||| || ||||| || || || || || ||||| | | Sbjct 14159727 TGCACGAAT----GCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGG 14159782 Query 63381 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 63440 ||||| | | | || | |||| ||||| || || | ||||| | || || | Sbjct 14159783 CGCATTGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGA 14159842 Query 63441 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAG 63500 ||||| |||| ||| ||||| | || | || ||| | || || |||||||||| Sbjct 14159843 AACAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGAG 14159902 Query 63501 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63560 | || | || || || | ||||||||||| | || | || || || | || Sbjct 14159903 TGAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCAT 14159962 Query 63561 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63620 ||||||| | ||| || ||||| | |||||| || || | || ||| || |||| Sbjct 14159963 GAATTCCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTCGGCGACTTTTCCATTTA 14160022 Query 63621 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63680 |||| | | ||| || |||| ||||||||| ||||| || || || |||||| | Sbjct 14160023 TTTTAAGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTAATTATAACCAAAGTCAC 14160082 Query 63681 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 63729 | || ||||| ||| ||||| || |||| || ||| || || || Sbjct 14160083 GATCATAAATTATAGATGAGTTAAGGCGATCCGCATTTTTTTTGACCAC 14160131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633523102420400