Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq13747 118 9e-22 seq13746 82.4 7e-11 >seq13747 Length=19884421 Score = 118 bits (130), Expect = 9e-22 Identities = 202/293 (69%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 50989 AACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCGTTCT 51048 || |||||| |||||| || ||||| || | || | ||||| || ||||| Sbjct 16052337 AATTTACGCCGACAGCCTTGATAATTCATGTAGCGTATCTTCCCAAAGATAGATCGTTCC 16052278 Query 51049 TTGAACGGCCTGTCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGTTAGGA 51108 || | | |||| || || || | || ||||||||||| ||||| || || || Sbjct 16052277 TTCCAGCCCATGTCATGGACTCCTCCGATAGACCACATACACCCCACGTATCCATTGGGG 16052218 Query 51109 TCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCATGTCT 51168 || || || |||| |||||| | ||| || || | ||||| || | | ||| || Sbjct 16052217 TCTCGTCCGTCCAGGCTGTACTTATCATTAAGTAGAATGGCGTACTCTAGGGCCTGCTCG 16052158 Query 51169 GCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGCATC 51228 | | | |||||||| | || ||||| |||||||||||||||| | | ||||||||| Sbjct 16052157 GGAGTCTCTGTCCATTCGAGGATCTTCTTAGCCCAGTACATGCGCAGGAAGCCGTGCATC 16052098 Query 51229 TTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGT 51281 |||||||| | || ||| ||| ||||| ||||||| ||||||| ||| Sbjct 16052097 TTGCCCTCACGTACCAGTTGCAATTGGGCCGAATTCCACAGGTCGTCGTAAGT 16052045 >seq13746 Length=16180835 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | || || || |||| Sbjct 14254218 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCG 14254277 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || ||||| |||| |||| || | ||| ||||||||||| ||||| || || Sbjct 14254278 GATACCATCGAAAATGTCA---AAGCCAAGATTCAG-GACAAAGAAGGAATTCCTCCAGA 14254333 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| | || || || ||||| || | ||||||| |||||| | || || Sbjct 14254334 TCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTA 14254393 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || | || || ||||| Sbjct 14254394 TAACATTCAGAAGGAGTCTACCTTGCACTTGGTGCT 14254429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433255388987435