Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq13747 118 9e-22
seq13746 82.4 7e-11
>seq13747
Length=19884421
Score = 118 bits (130), Expect = 9e-22
Identities = 202/293 (69%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 50989 AACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCGTTCT 51048
|| |||||| |||||| || ||||| || | || | ||||| || |||||
Sbjct 16052337 AATTTACGCCGACAGCCTTGATAATTCATGTAGCGTATCTTCCCAAAGATAGATCGTTCC 16052278
Query 51049 TTGAACGGCCTGTCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGTTAGGA 51108
|| | | |||| || || || | || ||||||||||| ||||| || || ||
Sbjct 16052277 TTCCAGCCCATGTCATGGACTCCTCCGATAGACCACATACACCCCACGTATCCATTGGGG 16052218
Query 51109 TCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCATGTCT 51168
|| || || |||| |||||| | ||| || || | ||||| || | | ||| ||
Sbjct 16052217 TCTCGTCCGTCCAGGCTGTACTTATCATTAAGTAGAATGGCGTACTCTAGGGCCTGCTCG 16052158
Query 51169 GCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGCATC 51228
| | | |||||||| | || ||||| |||||||||||||||| | | |||||||||
Sbjct 16052157 GGAGTCTCTGTCCATTCGAGGATCTTCTTAGCCCAGTACATGCGCAGGAAGCCGTGCATC 16052098
Query 51229 TTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGT 51281
|||||||| | || ||| ||| ||||| ||||||| ||||||| |||
Sbjct 16052097 TTGCCCTCACGTACCAGTTGCAATTGGGCCGAATTCCACAGGTCGTCGTAAGT 16052045
>seq13746
Length=16180835
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || ||||||| | || || || ||||
Sbjct 14254218 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCG 14254277
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || ||||| |||| |||| || | ||| ||||||||||| ||||| || ||
Sbjct 14254278 GATACCATCGAAAATGTCA---AAGCCAAGATTCAG-GACAAAGAAGGAATTCCTCCAGA 14254333
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| ||||| | || || || ||||| || | ||||||| |||||| | || ||
Sbjct 14254334 TCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTA 14254393
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || || | || || |||||
Sbjct 14254394 TAACATTCAGAAGGAGTCTACCTTGCACTTGGTGCT 14254429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433255388987435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |