Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq13747 271 8e-68 seq13749 123 3e-23 >seq13747 Length=19884421 Score = 271 bits (300), Expect = 8e-68 Identities = 602/893 (67%), Gaps = 15/893 (2%) Strand=Plus/Plus Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACAT 92802 |||||||| || ||||| ||||| |||||||| || | || || || | || ||| Sbjct 8706088 TAGAAATCGGCGTCTAGGGTAAAGACATTGTCCAGGCGGTTGGTAGCCA---CGCC-CAT 8706143 Query 92803 TTT-TGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 ||||| || || || || ||||||||||| || ||||| || |||| || ||| Sbjct 8706144 ACGCTGGTACTCTCCCACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCAT 8706203 Query 92862 ATTCACTAG--TGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAA 92919 | || | ||| || || |||| ||| || || | || || ||| || Sbjct 8706204 CTCCATGAAATTGAAAGGGTTTTTGGTGTTGTAGATTTTGCCTACGCCCAGCTCTACCAG 8706263 Query 92920 TAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAG 92979 || | || || |||||||| ||||| || |||||||| || || ||||| || | | Sbjct 8706264 TAGCCGGTCCGCCACAAATTCGATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAA 8706323 Query 92980 ACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGAT 93039 | || || | |||||||| | ||| || | ||| || | || || || | || Sbjct 8706324 ATTCACGGGCAAGGCGTCGGTGAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAAT 8706383 Query 93040 TTCTATTA--CTCTA-CTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCAC-G 93095 || || | | || | | ||||||| || |||| | | | |||| |||||| | Sbjct 8706384 CTCGATGATGCGCTCGCGAC---GTGGTTTCTGGACGAGGTGCTGGAACAT-AAGCACAG 8706439 Query 93096 CAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTG 93155 | |||||| || | ||||||||| | || || | ||| ||| ||| || | ||| | Sbjct 8706440 CGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCGG 8706499 Query 93156 GTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATAC 93215 | | || ||||| ||||| | ||| || || || ||||| || || || ||||||| Sbjct 8706500 GCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATAC 8706559 Query 93216 CTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCC 93275 | |||||||| |||||||| | || || || |||| || || || || |||| Sbjct 8706560 CCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTTGGCTGACTTCGAAGAAATCC 8706619 Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335 | | ||||||||| || || ||| | ||| | || || || || || || | Sbjct 8706620 AGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGAACA 8706679 Query 93336 GGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAG 93395 |||| || |||| || | |||||| ||||| |||||||| | || | ||||| |||| Sbjct 8706680 GGTATTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATCTCAG 8706739 Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455 | || || || ||||| || |||||||| ||||||||||| | || ||||||| ||| | Sbjct 8706740 AGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCTGAA 8706799 Query 93456 CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515 | || ||| || | ||| || || || || || || || ||||| || || ||||| | Sbjct 8706800 CCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCAAAGA 8706859 Query 93516 aaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATA 93575 | |||| | || || || || || || || ||||| || |||||||| | Sbjct 8706860 AGGCCAGCACGTGGGAGATGAAGTGGCGTTCGTCGTCCTTAAGGCGATGCCAATCGGTGA 8706919 Query 93576 GATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628 |||| || || || || || || ||||||||||| || || ||||| || ||| Sbjct 8706920 GATCCTTCGAGAGGTCCACCTCCTCGACAGTCCAGAAAGAGGCTTCAGCCTTT 8706972 >seq13749 Length=23697760 Score = 123 bits (136), Expect = 3e-23 Identities = 81/87 (93%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTC-CCTC-GGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||| | || | |||| Sbjct 14772325 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCATCTGAGAGC 14772266 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 14772265 GTGGGTTCGAACCCCACACCTGACAAA 14772239 Score = 118 bits (130), Expect = 1e-21 Identities = 79/87 (91%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||| | | |||| Sbjct 22406008 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 22405949 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 22405948 GTGGGTTCGAACCCCACACCTGACAAA 22405922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556765096510760