Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 114 3e-20
seq13747 91.5 3e-13
seq13723 89.7 1e-12
seq13705 89.7 1e-12
seq13728 86.0 1e-11
seq13692 86.0 1e-11
seq2230 86.0 1e-11
>seq13746
Length=16180835
Score = 114 bits (126), Expect = 3e-20
Identities = 219/323 (68%), Gaps = 0/323 (0%)
Strand=Plus/Plus
Query 218504 ACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGG 218563
||||| || | | ||||||||| || |||| | |||| ||||| || |
Sbjct 12128269 ACATCACCTACGCGGACTTCATCAACCTGGAGTTGGTTCTCTTCTCTAACGCCGACAACG 12128328
Query 218564 AGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTG 218623
|||| || |||||||| ||||||||||| | ||||| ||||| ||| || | ||
Sbjct 12128329 AGCGCTCCATTCCCAGTCTGGTGGATGGCTTGAAGCCCGGCCAGCGCAAGGTCATGTTCA 12128388
Query 218624 CCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTAT 218683
|| |||||| | ||| | ||| | ||||| || ||||| || |||| ||
Sbjct 12128389 CCTGCTTCAAGAGAAACGATAAGCGCGAAGTGAAGGTAGCCCAGTTGTCCGGTTCAGTGG 12128448
Query 218684 CCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGG 218743
|||| || || | |||||||||||| ||| | |||||| |||| ||| | |||
Sbjct 12128449 CCGAGATGTCGGCCTACCATCACGGCGAGGTGTCACTGCAGATGACCATCGTAAACTTGG 12128508
Query 218744 CACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTT 218803
| ||| ||||||| ||| |||||||| || ||||| ||| |||||||| |||
Sbjct 12128509 CCCAGAACTATGTCGGCTCGAACAACATTAATCTGCTGGAGCCCCGAGGTCAGTTCGGTA 12128568
Query 218804 CTCGTCTATTGGGTGGAAAGGAT 218826
|||| | ||| || ||||||
Sbjct 12128569 CTCGGTTGACGGGCGGCAAGGAT 12128591
Score = 84.2 bits (92), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 142057 CTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116
|| ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 6503384 CTTTGGCGCAGCGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGATCCCCG 6503325
Query 142117 CCAG 142120
| ||
Sbjct 6503324 CAAG 6503321
>seq13747
Length=19884421
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 9158558 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 9158499
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 9158498 CCCCACGTTGGGC 9158486
Score = 91.5 bits (100), Expect = 3e-13
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 9636839 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9636780
Query 142564 CCCACATCGGGCAGAAG 142580
||||| | |||| ||||
Sbjct 9636779 CCCACGTTGGGC-GAAG 9636764
Score = 91.5 bits (100), Expect = 3e-13
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 18767073 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 18767132
Query 142564 CCCACATCGGGCAGAAG 142580
||||| | |||| ||||
Sbjct 18767133 CCCACGTTGGGC-GAAG 18767148
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||| || ||||||| ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 8759864 TGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGAT 8759805
Query 142112 CCCCGCCAGAGA 142123
|||||| || ||
Sbjct 8759804 CCCCGCAAGGGA 8759793
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 9158001 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9157942
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 9157941 CCCACGTTGGGC 9157930
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 9159117 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9159058
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 9159057 CCCACGTTGGGC 9159046
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 9637235 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9637176
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 9637175 CCCACGTTGGGC 9637164
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 9637692 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9637633
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 9637632 CCCACGTTGGGC 9637621
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 9638063 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9638004
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 9638003 CCCACGTTGGGC 9637992
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 18738422 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 18738363
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 18738362 CCCACGTTGGGC 18738351
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 18742130 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 18742071
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 18742070 CCCACGTTGGGC 18742059
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 18747230 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 18747171
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 18747170 CCCACGTTGGGC 18747159
>seq13723
Length=1428709
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1101591 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1101650
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 1101651 CCCACGTTGGGC 1101662
>seq13705
Length=569066
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 120458 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 120517
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 120518 CCCACGTTGGGC 120529
>seq13728
Length=1584923
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct 1035971 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGGGC 1036030
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 1036031 CCCACGTTGGGC 1036042
>seq13692
Length=240082
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct 81612 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGGGC 81553
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 81552 CCCACGTTGGGC 81541
>seq2230
Length=1102
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct 984 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGGGC 925
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 924 CCCACGTTGGGC 913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027655737232909
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |