Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 111 1e-19
seq13748 91.5 1e-13
>seq13746
Length=16180835
Score = 111 bits (122), Expect = 1e-19
Identities = 168/238 (71%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | || || || || | ||||| || || |||||||| || ||
Sbjct 14254445 ACCACCACGAAGGCGCAGCACCAAGTGCAAGGTAGACTCCTTCTGAATGTTATAGTCAGA 14254386
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || ||| |||||| || || || |||||| |||| |||||||| || || |||||
Sbjct 14254385 GAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 14254326
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||||||||| |||||| ||| | | ||| | ||| || | | ||||||
Sbjct 14254325 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGAC 14254266
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAATTA 114392
|| | || | || ||||| || || || || || || |||||||| ||| ||||
Sbjct 14254265 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT--CTTGATTA 14254210
>seq13748
Length=23293914
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || || || | || || || || ||||||||||| ||
Sbjct 9537224 ATTCCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCC 9537165
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || || || || ||| |||| | |||||| ||||| ||
Sbjct 9537164 GACAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGG 9537105
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| ||| | | |||| |||||||| || ||
Sbjct 9537104 GGGATTCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCAATGGTGTCGGAGGGCTCC 9537045
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | ||||| || |||| ||||| || || ||||||||
Sbjct 9537044 ACCTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACGAAGATCTGCAT 9536995
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || || || | || ||||| || ||||||||||| ||
Sbjct 9538136 ATTCCACCACGAAGACGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCC 9538077
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || || || || ||| |||| | |||||| ||||| ||
Sbjct 9538076 GACAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGG 9538017
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| || | | || | ||| |||| || ||
Sbjct 9538016 GGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCA 9537957
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | ||||| ||||||| || ||||| || ||||||||
Sbjct 9537956 ACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATCTGCAT 9537907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420063999785388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |