Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq13747 273 4e-68 seq13746 158 2e-33 >seq13747 Length=19884421 Score = 273 bits (302), Expect = 4e-68 Identities = 511/735 (70%), Gaps = 27/735 (4%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 ||||||||||| || || || || || || || || |||||||||| | |||| Sbjct 8706866 CTGGCCTTCTTTGCTGCTTCGGATGGAATTGTGAACGAGAACCTGGTGGAGCGCTTCAGT 8706807 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 | ||||| ||| | ||||||||||| |||||||| ||||| || ||||| || ||| Sbjct 8706806 CAGGAGGTTCAGGTCACGGAGGCGCGCTGTTTCTACGGTTTCCAAATCGCCATGGAAAAC 8706747 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAAC---ACGTACATCCTGGATCCCGTCGAG 42599 |||||||||||| ||||| | |||||| | || ||||| | |||||| | || Sbjct 8706746 GTGCACTCTGAGATGTAC---AGTGTGCTCATCGATACTTACATTCGAGATCCCCACCAG 8706690 Query 42600 CGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGC-ATCAAGAAGAAGGCGGACTG 42658 ||| | |||||||| ||||| ||||||||| ||||| | ||| ||||| || || Sbjct 8706689 CGTGAATACCTGTTCAATGCCATTGAGACGATG-CCTGCGGTGAAGCGCAAGGCAGATTG 8706631 Query 42659 GGCGCTCAACTGGA-----TCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCC 42713 ||| || ||||| |||| |||| | |||| || || ||| | | | || Sbjct 8706630 GGCTCTGGCCTGGATTTCTTCGA-AGTC---AGCCAAC-TTTGGGGAGCGCATCATCGCA 8706576 Query 42714 TTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAG 42773 ||| | ||||| ||||| || |||||| ||| ||| ||||| ||||||||| | ||| Sbjct 8706575 TTTGCTGCCGTGGAGGGTATATTCTTCAGCGGCAGCTTTGCCTCTATCTTCTGGTTGAAG 8706516 Query 42774 CAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGG 42832 || |||| | ||||||||| || |||||||| ||||| || ||| ||||||||| || Sbjct 8706515 AAGCGAGGT-TTGATGCCCGGTCTGACCTTCTCCAACGAGCTTATCTCCAGGGACGAAGG 8706457 Query 42833 GCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAA 42892 ||||| | ||||| || || ||||| | |||||| || || || || Sbjct 8706456 TCTGCACTGCGACTTCGCTGTGCTTATGTTCCAG---CACCTCGTCCAGAA-ACCACGTC 8706401 Query 42893 G-GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC 42951 | ||||| || | || ||| || || ||||| || ||| ||||||||||||| Sbjct 8706400 GCGAGCGCATCATCGAGATTATCCGCGATGCTGTGGACATTGAGCAGGAGTTCCTCACCG 8706341 Query 42952 AGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGT-GCAAGTACATCCAG 43010 | | |||||||| || ||||||||||| |||| | |||| |||| |||||| | Sbjct 8706340 ACGCCTTGCCCGTGAATTTGATCGGCATGAACTGCGACTTGATGTCGCAA-TACATCGAA 8706282 Query 43011 TACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGC 43070 | || || |||| || ||| || |||| | || |||||||||| | Sbjct 8706281 TTTGTGGCGGACCGGCTACTGGTAGAGCTGGGCGTAGGCAAAATCTACAACACCAAAAAC 8706222 Query 43071 CCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGC 43130 || ||| | || ||||||| |||||| |||| || ||||||||||| || || ||| Sbjct 8706221 CCTTTCAATTTCATGGAGATGATCTCGCTGGACGGGAAGACCAACTTCTTTGAAAAGAAG 8706162 Query 43131 GTCGCCGACTACCAG 43145 || | || |||||| Sbjct 8706161 GTGGGAGAGTACCAG 8706147 >seq13746 Length=16180835 Score = 158 bits (174), Expect = 2e-33 Identities = 903/1422 (64%), Gaps = 66/1422 (5%) Strand=Plus/Plus Query 243766 CTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCAT 243825 ||| || | || ||||||||| ||||| || || ||| ||||| || || || || Sbjct 14158272 CTTTGTGCGCAAGTAGTACATTCCGGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAAT 14158331 Query 243826 GGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGA 243885 || || ||||| | ||| || ||||| || || | | || |||| ||| Sbjct 14158332 GGATGTGAGCTT-TCCAT----AG-TTTGGCTCTGCCAC------ATGGATATTGAAGGA 14158379 Query 243886 CTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTT---CTG 243942 ||||||||| || | || | | || || |||||||| | ||| | | || ||| Sbjct 14158380 CTGGCTCTGATCTATAAACGCACCGCGATCAGCGGCCATTTTAATG-GTTGATTTCACTG 14158438 Query 243943 AGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCC-TTCGATGT 244001 |||| || ||||| || ||||| | || | || | |||||| ||| || | Sbjct 14158439 AGATTTCCCATACT--GTTTTGTAAA-GGTCGCGAACCTTTTGGGGAATGGATTCAATAT 14158495 Query 244002 TCTGCACCGAGCCCTTG-TGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCC 244060 | || | || ||| || |||| ||| | ||| | ||||| ||||| ||||| || Sbjct 14158496 TTTGAATAGATCCCCTGCTGGA-GATTATCTGATTCTTCATGTCATCGTCCCACAAATCC 14158554 Query 244061 AAGCGC--TCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCA 244118 | || | || || |||| | || || ||| ||||| || ||||| || || || | Sbjct 14158555 A-GCTCCGTCAAGTCCCTC-AGCAAATGATGGTTAACCACTTGGAACTCCCCGGAGAGTA 14158612 Query 244119 CGCGGCGCTGGTAGAGGTTGCTGCTGAGC--GGCTCGATGCTCTCCGTGTTGCCCAGTAT 244176 |||| | ||||| | | || || | ||||||| | ||| |||| |||| || Sbjct 14158613 CGCGTC--TGGTATAAATATTTGTTGTGTAGGGCTCGAAGGACTCGTTGTTACCCATAAT 14158670 Query 244177 CTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCT 244236 ||| || || || || ||||| || | |||| || ||| || || || ||| Sbjct 14158671 CTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAGTTTCTGACTCCATGCTG 14158730 Query 244237 CTGGATGCGGAGTC--TGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTG 244294 | ||| || || | || ||||||||||| | || | || |||||| Sbjct 14158731 TTTGATA--GACTCCTTCAGAGATTTCCAGTCCCAGAGACCAG-----TCG--GCGTTTT 14158781 Query 244295 AGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGG 244354 | |||||||||| ||||||| | ||||| || || ||||| || || || || Sbjct 14158782 AT--CCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATAAGTTTCA 14158839 Query 244355 TAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTC 244414 || | ||||| |||||||| | || || | || ||||| | ||||||| || Sbjct 14158840 TAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAGATTGTT 14158899 Query 244415 TCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATC 244474 || || ||| | ||||| | || |||| ||| | |||| | ||| | Sbjct 14158900 TCAAAAATCTGTTGGTTCAAGAGGCTTGCCTCCTCGCTTTCGTAGGGATAACGCATAAGA 14158959 Query 244475 ATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAG 244534 || | |||| ||||||||||| || ||||| ||||| || | || | | | ||||| Sbjct 14158960 ATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCATATTGGAC 14159019 Query 244535 CGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTG 244594 | |||| || |||| || ||||||||| || || | ||| |||||||| | || Sbjct 14159020 TTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGTTTCTGGCC 14159079 Query 244595 ATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATG 244654 | | | ||| || ||| | ||||| || | | ||||| Sbjct 14159080 ACCGTCTTTGTGACCTCCTTTAGCTTTTTGAAGTCATAT------GTCTTCTCGG----- 14159128 Query 244655 GTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCC 244714 || |||||||| |||||| |||| | ||||| ||||| || || | ||| || Sbjct 14159129 --GAG--TCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTC- 14159183 Query 244715 GAGTTGGTG--TACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772 || || | |||| ||||| || ||||| || || |||||||| |||||||||| | Sbjct 14159184 -AGGTGAAGAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACAT 14159242 Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832 ||| || ||| ||| |||||||||||||||| | |||||| | || || |||| Sbjct 14159243 TCTGTTGGTTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCT 14159302 Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCC--TGCGAGC 244890 | | || | | | || ||| | | | || || || || | | | || Sbjct 14159303 CCACTTGCGACTCAATGATAGCAAACCACAAGGACTGTGCTTTCACAGTTCGATTGGCGC 14159362 Query 244891 CTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTC 244950 | ||||| ||||| || || || ||||| |||||| || || | Sbjct 14159363 GT--CCCTCCTGTTCGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATG 14159420 Query 244951 TAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTG 245010 ||||| ||||| || ||||| | ||| || | | ||| || | | Sbjct 14159421 GAGGCCAGGGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTT 14159480 Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070 ||||||||| || || ||||| ||||| | ||| | || | || | ||||| ||| Sbjct 14159481 CATGAAGAGATCTGGTATCCACAGGGCATAGAACAAATCGCGGGCTCGATGCTCTTCCTT 14159540 Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 |||||| |||||| | || |||| ||| ||||| || || ||||||||||||| || Sbjct 14159541 GCCAGTATTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATA 14159600 Query 245131 GACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 | || | ||| || ||||||||| || ||||| ||||| Sbjct 14159601 AATGGCAAAGGCTCCCGGCCGCTTGCCACCACCCTGATCCAC 14159642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944176903504240