Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq13746 134 1e-26 >seq13746 Length=16180835 Score = 134 bits (148), Expect = 1e-26 Identities = 388/597 (65%), Gaps = 20/597 (3%) Strand=Plus/Plus Query 20171 AGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCG 20230 |||||||| | || || ||| | || | ||||||| ||||| | || || || Sbjct 795618 AGTGGCTCCACGTGATTTAGGTATACATGCGTGTCTCCCATAGTGTGTACGAAGTCACCA 795677 Query 20231 GGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTA 20290 || | |||||||| ||||| || | |||||| || || | || |||| ||||||||| Sbjct 795678 GGCTTTAGACCAGTGACATGGGCGATCATATAGGTCAACAAGGCATAGGAGGCAATGTTG 795737 Query 20291 AAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCG 20350 || || || |||| |||||||| | | ||||||||||| ||||| || || ||| Sbjct 795738 AAGGGTACACCCAGGCCCATGTCGGCGCTTCGTTGATACAGCTGGCAGGAGAGTTCGCCG 795797 Query 20351 ------TCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGAC 20404 | || |||||||| ||| || |||| || || || | ||||| | Sbjct 795798 CGCTCCTGAGAGACATAAAACTGAGCCAAGCAGTGGCACGGAGGCAATGCCATTTTTGGA 795857 Query 20405 AAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATT 20464 | |||| || |||||||| |||| ||||| | |||||| ||||| || ||||| Sbjct 795858 ATGTCCAGAGGATTCCACGCCGACATGATGATCCGTCTATCCGAAGGATTCTTCTTTATC 795917 Query 20465 AAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCC 20524 || | | | | | ||| || | |||| || |||||| | || | Sbjct 795918 GTGTCAATGACATGCTTTAGTTGATCGATACCCTTTCCACGGTAGTCATCGTCACAGGTA 795977 Query 20525 ACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCC 20584 || | || |||||||||| ||| ||||||||||| || || ||||| || || | Sbjct 795978 GTATATTCGGCGCCAAAGTGCCGCCATTGGAAACCGTACACCGGGCCCAAGTCTCCAACG 796037 Query 20585 CTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATC 20644 | || || | ||| || | | ||||||||||||| || ||| |||||| || Sbjct 796038 GCACGGTCCGTATGTCCGAGCTTGTCTAGGAACTCCCTGGTGCTGTTTCCGTCCCAGATG 796097 Query 20645 TTGACTCCTGTTCTTG-------AAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCA 20697 | || ||||||| |||||| | | ||| || | || || |||||| Sbjct 796098 TGAAC----GTTCTTGGCCTGCAAAAGCT---TAGCGTCCGTCTTGCCGGCCACAAACCA 796150 Query 20698 AAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAA 20754 ||||| ||||| |||| | || | || || || || ||||| | |||||||| Sbjct 796151 AAGCAACTCTTCGGCTACTGCCCGGAAGAAGACACGTTTGGTGGTCAACAAGGGAAA 796207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441296944567160