Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 134 1e-26
>seq13746
Length=16180835
Score = 134 bits (148), Expect = 1e-26
Identities = 388/597 (65%), Gaps = 20/597 (3%)
Strand=Plus/Plus
Query 20171 AGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCG 20230
|||||||| | || || ||| | || | ||||||| ||||| | || || ||
Sbjct 795618 AGTGGCTCCACGTGATTTAGGTATACATGCGTGTCTCCCATAGTGTGTACGAAGTCACCA 795677
Query 20231 GGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTA 20290
|| | |||||||| ||||| || | |||||| || || | || |||| |||||||||
Sbjct 795678 GGCTTTAGACCAGTGACATGGGCGATCATATAGGTCAACAAGGCATAGGAGGCAATGTTG 795737
Query 20291 AAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCG 20350
|| || || |||| |||||||| | | ||||||||||| ||||| || || |||
Sbjct 795738 AAGGGTACACCCAGGCCCATGTCGGCGCTTCGTTGATACAGCTGGCAGGAGAGTTCGCCG 795797
Query 20351 ------TCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGAC 20404
| || |||||||| ||| || |||| || || || | ||||| |
Sbjct 795798 CGCTCCTGAGAGACATAAAACTGAGCCAAGCAGTGGCACGGAGGCAATGCCATTTTTGGA 795857
Query 20405 AAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATT 20464
| |||| || |||||||| |||| ||||| | |||||| ||||| || |||||
Sbjct 795858 ATGTCCAGAGGATTCCACGCCGACATGATGATCCGTCTATCCGAAGGATTCTTCTTTATC 795917
Query 20465 AAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCC 20524
|| | | | | | ||| || | |||| || |||||| | || |
Sbjct 795918 GTGTCAATGACATGCTTTAGTTGATCGATACCCTTTCCACGGTAGTCATCGTCACAGGTA 795977
Query 20525 ACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCC 20584
|| | || |||||||||| ||| ||||||||||| || || ||||| || || |
Sbjct 795978 GTATATTCGGCGCCAAAGTGCCGCCATTGGAAACCGTACACCGGGCCCAAGTCTCCAACG 796037
Query 20585 CTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATC 20644
| || || | ||| || | | ||||||||||||| || ||| |||||| ||
Sbjct 796038 GCACGGTCCGTATGTCCGAGCTTGTCTAGGAACTCCCTGGTGCTGTTTCCGTCCCAGATG 796097
Query 20645 TTGACTCCTGTTCTTG-------AAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCA 20697
| || ||||||| |||||| | | ||| || | || || ||||||
Sbjct 796098 TGAAC----GTTCTTGGCCTGCAAAAGCT---TAGCGTCCGTCTTGCCGGCCACAAACCA 796150
Query 20698 AAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAA 20754
||||| ||||| |||| | || | || || || || ||||| | ||||||||
Sbjct 796151 AAGCAACTCTTCGGCTACTGCCCGGAAGAAGACACGTTTGGTGGTCAACAAGGGAAA 796207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441296944567160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |