Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq13747 109 4e-19
seq4517 104 2e-17
seq1677 98.7 8e-16
seq13746 91.5 1e-13
seq13745 82.4 6e-11
seq13647 82.4 6e-11
>seq13747
Length=19884421
Score = 109 bits (120), Expect = 4e-19
Identities = 140/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 37840 TGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCA 37899
||||||| |||| ||| | || || || || ||||| |||||||| | ||||||
Sbjct 16052058 TGTGGAATTCGGCCCAATTGCAACTGGTACGTGAGGGCAAGATGCACGGCTTCCTGCGCA 16052117
Query 37900 TGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACCGCGCTCAACTACG 37959
|||| ||| ||||| || | |||||| | || | | || || || | ||||
Sbjct 16052118 TGTACTGGGCTAAGAAGATCCTCGAATGGACAGAGACTCCCGAGCAGGCCCTAGAGTACG 16052177
Query 37960 CCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCT 38019
||||| || ||||||||||||||| ||||||| || || ||||| || ||||| || |
Sbjct 16052178 CCATTCTACTTAATGATAAGTACAGCCTGGACGGACGAGACCCCAATGGATACGTGGGGT 16052237
Query 38020 GTTTGTGGTCTAT 38032
|| ||||||||||
Sbjct 16052238 GTATGTGGTCTAT 16052250
>seq4517
Length=1281
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 1229 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 1170
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 1169 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1139
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 1229 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 1170
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 1169 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1139
>seq1677
Length=1058
Score = 98.7 bits (108), Expect = 8e-16
Identities = 78/91 (86%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||
Sbjct 1006 CATGTATTAGCTCTAGAAATACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 947
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 946 ATAACTGATATAATGAGCCTTTTGCGGTTTC 916
Score = 98.7 bits (108), Expect = 8e-16
Identities = 78/91 (86%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||
Sbjct 1006 CATGTATTAGCTCTAGAAATACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 947
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 946 ATAACTGATATAATGAGCCTTTTGCGGTTTC 916
>seq13746
Length=16180835
Score = 91.5 bits (100), Expect = 1e-13
Identities = 167/238 (70%), Gaps = 5/238 (2%)
Strand=Plus/Minus
Query 33892 CAATCGAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTG 33951
|||| || ||| || | ||| || ||||||||||| || || ||||||||| ||||||
Sbjct 2088101 CAAT-GATACCACCGCGCAGACGGAGCACCAGATGCAGAGTCGACTCCTTCTGGATGTTG 2088043
Query 33952 TAATCTGCCAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTG 34010
|| || | || || || | || |||| ||||||||||| || ||||| ||||||||
Sbjct 2088042 TAGTCGGA-AAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG 2087984
Query 34011 ATCCACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAG 34069
||| || | || |||||||||| || || ||| | ||| | | || |
Sbjct 2087983 ATCTGGAGGGATGCCCTCTTTGTCCTGGATCTTAGCCTTCA-CATTCTCGATGGTGTCCG 2087925
Query 34070 TAGATTCGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
| ||| |||| || || || || ||||| || |||||||| |||||||||||
Sbjct 2087924 ACGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2087867
>seq13745
Length=6960332
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||| | ||| || ||||||| || || || ||||||||| |||||||| || | |
Sbjct 841367 CCTCCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 841426
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || |||| |||| ||||||||||| || ||||| ||||||||||| ||
Sbjct 841427 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 841486
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||| ||||||
Sbjct 841487 ATGCCCTCCTTGTCC 841501
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||| | || || ||||||||||| || || ||||||||| |||||||| || | |
Sbjct 841823 CCTCCGCGGAGGCGGAGCACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 841882
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || |||| |||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct 841883 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 841942
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||| ||||||
Sbjct 841943 ATGCCCTCCTTGTCC 841957
>seq13647
Length=96352
Score = 82.4 bits (90), Expect = 6e-11
Identities = 76/90 (84%), Gaps = 5/90 (6%)
Strand=Plus/Minus
Query 115532 ATGTATT-GCTCTAGAATTA-CCAC-GTTAT-CCAAGTAACTGAGTAAGATCTAAGGAAC 115587
||||||| |||||||||||| |||| ||||| ||||||||||| | ||||||||||||
Sbjct 41702 ATGTATTAGCTCTAGAATTAACCACAGTTATTCCAAGTAACTGTTAACGATCTAAGGAAC 41643
Query 115588 CAAAACT-GATATATTGAGCCATTCGTGGT 115616
|| |||| |||||| |||||| || | |||
Sbjct 41642 CATAACTGGATATAATGAGCCTTTTGCGGT 41613
Score = 82.4 bits (90), Expect = 6e-11
Identities = 76/90 (84%), Gaps = 5/90 (6%)
Strand=Plus/Minus
Query 114335 ATGTATT-GCTCTAGAATTA-CCAC-GTTAT-CCAAGTAACTGAGTAAGATCTAAGGAAC 114390
||||||| |||||||||||| |||| ||||| ||||||||||| | ||||||||||||
Sbjct 41702 ATGTATTAGCTCTAGAATTAACCACAGTTATTCCAAGTAACTGTTAACGATCTAAGGAAC 41643
Query 114391 CAAAACT-GATATATTGAGCCATTCGTGGT 114419
|| |||| |||||| |||||| || | |||
Sbjct 41642 CATAACTGGATATAATGAGCCTTTTGCGGT 41613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396995865866698
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |