Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13746 134 3e-26 seq13745 132 1e-25 seq3735 120 7e-22 >seq13746 Length=16180835 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| | ||| ||||| || ||||| | || || || |||||| Sbjct 14254408 TCCTTCTGAATGTTATAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCGAAG 14254349 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| ||| ||||| ||||||||||| ||||| || || ||||| || Sbjct 14254348 ATCAGACGCTGCTGA---TCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 14254292 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | ||| || ||| || || || ||||| ||||| || || || ||||| Sbjct 14254291 TTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTA 14254232 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 14254231 ACGAAGATCTGCAT 14254218 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || ||||| | || || || ||||| || ||||||| Sbjct 2088093 CCACCGCGCAGACGGAGCACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 2088034 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || || || | || || || ||||||||||||||||| || |||| Sbjct 2088033 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGA 2087977 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || ||||| |||||||| || || ||||| || || || | || || || Sbjct 2087976 GGGATGCCCTCTTTGTCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCCGACGGCTCG 2087917 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || || || ||||| || ||||| Sbjct 2087916 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2087867 >seq13745 Length=6960332 Score = 132 bits (146), Expect = 1e-25 Identities = 172/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | ||||| | || | || || || ||||| || |||| Sbjct 841135 CATG-CCTCCGCGGAGGCGGAGTACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGT 841193 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||||||||| || | || || || ||||||||||||||||| || || Sbjct 841194 CGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---AT 841250 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || |||||||| || || |||||||| || || ||||| || || || | ||| | Sbjct 841251 CTGGAGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCGGAGG 841310 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 841311 GCTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 841365 Score = 132 bits (146), Expect = 1e-25 Identities = 172/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | || || ||||| | || || || ||||| || |||| Sbjct 841819 CATG-CCTCCGCGGAGGCGGAGCACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGT 841877 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||||||||| || | || ||||| ||||||||||||||||| || || Sbjct 841878 CGGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---AT 841934 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || ||||| || || || |||||||| || || ||||| || || || | ||| | Sbjct 841935 CTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGG 841994 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || || ||||| ||||| ||||| |||||||| Sbjct 841995 GCTCGACCTCCAGGGTGATGGTTTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842049 Score = 131 bits (144), Expect = 4e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || || || |||||| Sbjct 840947 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 841006 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| |||||||| || || |||||||| || || ||||| Sbjct 841007 ATCAGACGCTGCTG---ATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTCACA 841063 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | || || || || ||||| ||||| ||||| || ||||| Sbjct 841064 TTCTCAATGGTGTCGGATGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTC 841123 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 841124 ACGAAGATCTGCAT 841137 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || || || |||||| Sbjct 841631 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 841690 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| ||||| || || || |||||||| || || ||||| Sbjct 841691 ATCAGACGCTGCTG---ATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 841747 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | || || || || ||||| ||||| || ||||| ||||| Sbjct 841748 TTCTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 841807 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 841808 ACGAAGATCTGCAT 841821 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || || || |||||| Sbjct 842087 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 842146 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| ||||| || || || |||||||| || || ||||| Sbjct 842147 ATCAGACGCTGCTG---ATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 842203 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | || || || || ||||| ||||| || ||||| ||||| Sbjct 842204 TTCTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 842263 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 842264 ACGAAGATCTGCAT 842277 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || ||||| |||||| Sbjct 842315 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAG 842374 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| ||||| || || || |||||||| || || || || Sbjct 842375 ATCAGACGCTGCTG---ATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 842431 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | || || || || ||||| ||||| || ||||| ||||| Sbjct 842432 TTCTCGATGGTGTCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 842491 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 842492 ACGAAGATCTGCAT 842505 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || || || |||||| Sbjct 842543 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 842602 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| ||||| || || || |||||||| || || ||||| Sbjct 842603 ATCAGACGCTGCTG---ATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 842659 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || || ||||| ||||| || ||||| ||||| Sbjct 842660 TTCTCGATGGTATCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 842719 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 842720 ACGAAAATTTGCAT 842733 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || || || |||||| Sbjct 841403 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 841462 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| ||||| || || || |||||||| || || ||||| Sbjct 841463 ATCAGACGCTGCTG---ATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 841519 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | || || || | ||||| ||||| || ||||| ||||| Sbjct 841520 TTCTCAATGGTGTCGGAGGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTC 841579 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 841580 ACGAAGATCTGCAT 841593 >seq3735 Length=1215 Score = 120 bits (132), Expect = 7e-22 Identities = 153/208 (74%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTAT-AGTCGGCGAGCGTGCGTCCGTCTTCTAATTG 288329 |||| ||| ||| ||||||||||| | | || | || ||||| || || || | || Sbjct 1058 TGAAGGGTGGATTCCTTTTGGATATTTTAATTCCGACAGGGTGCGGCCATCCTCGAGCTG 999 Query 288330 TTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGAT 288386 ||||| |||||||||| |||||| || ||| |||||||| || || |||||||| Sbjct 998 CTTTCCGGCGAAGATCAAACGCTGCTG---TTCTGGGGGGATTCCCTCCTTGTCCTGGAT 942 Query 288387 TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCC 288446 || || |||||||| || || | |||| | || || || || ||||| || || || Sbjct 941 CTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCAACCTCCAGGGTGATGGTTTTTCC 882 Query 288447 GGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| ||||| ||||||||| Sbjct 881 GGTCAAGGTCTTCACGAAGATCTGCATT 854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179446593186822