Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 134 3e-26
seq13745 132 1e-25
seq3735 120 7e-22
>seq13746
Length=16180835
Score = 134 bits (148), Expect = 3e-26
Identities = 147/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || |||||||| | ||| ||||| || ||||| | || || || ||||||
Sbjct 14254408 TCCTTCTGAATGTTATAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCGAAG 14254349
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| ||| ||||| ||||||||||| ||||| || || ||||| ||
Sbjct 14254348 ATCAGACGCTGCTGA---TCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 14254292
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| || | ||| || ||| || || || ||||| ||||| || || || |||||
Sbjct 14254291 TTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTA 14254232
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 14254231 ACGAAGATCTGCAT 14254218
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || ||||| | || || || ||||| || |||||||
Sbjct 2088093 CCACCGCGCAGACGGAGCACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 2088034
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
|| ||||| || || || | || || || ||||||||||||||||| || ||||
Sbjct 2088033 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGA 2087977
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || ||||| |||||||| || || ||||| || || || | || || ||
Sbjct 2087976 GGGATGCCCTCTTTGTCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCCGACGGCTCG 2087917
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| ||||| || || || ||||| || |||||
Sbjct 2087916 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2087867
>seq13745
Length=6960332
Score = 132 bits (146), Expect = 1e-25
Identities = 172/235 (73%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || |||||||| | ||||| | || | || || || ||||| || ||||
Sbjct 841135 CATG-CCTCCGCGGAGGCGGAGTACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGT 841193
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||||||||| || | || || || ||||||||||||||||| || ||
Sbjct 841194 CGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---AT 841250
Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|| |||||||| || || |||||||| || || ||||| || || || | ||| |
Sbjct 841251 CTGGAGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCGGAGG 841310
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| ||||| || ||||| ||||| ||||||||
Sbjct 841311 GCTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 841365
Score = 132 bits (146), Expect = 1e-25
Identities = 172/235 (73%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || |||||||| | || || ||||| | || || || ||||| || ||||
Sbjct 841819 CATG-CCTCCGCGGAGGCGGAGCACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGT 841877
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||||||||| || | || ||||| ||||||||||||||||| || ||
Sbjct 841878 CGGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---AT 841934
Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|| ||||| || || || |||||||| || || ||||| || || || | ||| |
Sbjct 841935 CTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGG 841994
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| || || || ||||| ||||| ||||| ||||||||
Sbjct 841995 GCTCGACCTCCAGGGTGATGGTTTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842049
Score = 131 bits (144), Expect = 4e-25
Identities = 146/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||||||||| || | || || || ||||||
Sbjct 840947 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 841006
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||| |||||||| || || |||||||| || || |||||
Sbjct 841007 ATCAGACGCTGCTG---ATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTCACA 841063
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| ||||| || |||||
Sbjct 841064 TTCTCAATGGTGTCGGATGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTC 841123
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 841124 ACGAAGATCTGCAT 841137
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||||||||| || | || || || ||||||
Sbjct 841631 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 841690
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||| ||||| || || || |||||||| || || |||||
Sbjct 841691 ATCAGACGCTGCTG---ATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 841747
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| || ||||| |||||
Sbjct 841748 TTCTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 841807
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 841808 ACGAAGATCTGCAT 841821
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||||||||| || | || || || ||||||
Sbjct 842087 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 842146
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||| ||||| || || || |||||||| || || |||||
Sbjct 842147 ATCAGACGCTGCTG---ATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 842203
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| || ||||| |||||
Sbjct 842204 TTCTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 842263
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 842264 ACGAAGATCTGCAT 842277
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||||||||| || | || ||||| ||||||
Sbjct 842315 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAG 842374
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||| ||||| || || || |||||||| || || || ||
Sbjct 842375 ATCAGACGCTGCTG---ATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 842431
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| || ||||| |||||
Sbjct 842432 TTCTCGATGGTGTCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 842491
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 842492 ACGAAGATCTGCAT 842505
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||||||||| || | || || || ||||||
Sbjct 842543 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 842602
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||| ||||| || || || |||||||| || || |||||
Sbjct 842603 ATCAGACGCTGCTG---ATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 842659
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | |||| | || || || || ||||| ||||| || ||||| |||||
Sbjct 842660 TTCTCGATGGTATCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 842719
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 842720 ACGAAAATTTGCAT 842733
Score = 122 bits (134), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||||||||| || | || || || ||||||
Sbjct 841403 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 841462
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||| ||||| || || || |||||||| || || |||||
Sbjct 841463 ATCAGACGCTGCTG---ATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 841519
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || | ||||| ||||| || ||||| |||||
Sbjct 841520 TTCTCAATGGTGTCGGAGGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTC 841579
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 841580 ACGAAGATCTGCAT 841593
>seq3735
Length=1215
Score = 120 bits (132), Expect = 7e-22
Identities = 153/208 (74%), Gaps = 7/208 (3%)
Strand=Plus/Minus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTAT-AGTCGGCGAGCGTGCGTCCGTCTTCTAATTG 288329
|||| ||| ||| ||||||||||| | | || | || ||||| || || || | ||
Sbjct 1058 TGAAGGGTGGATTCCTTTTGGATATTTTAATTCCGACAGGGTGCGGCCATCCTCGAGCTG 999
Query 288330 TTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGAT 288386
||||| |||||||||| |||||| || ||| |||||||| || || ||||||||
Sbjct 998 CTTTCCGGCGAAGATCAAACGCTGCTG---TTCTGGGGGGATTCCCTCCTTGTCCTGGAT 942
Query 288387 TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCC 288446
|| || |||||||| || || | |||| | || || || || ||||| || || ||
Sbjct 941 CTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCAACCTCCAGGGTGATGGTTTTTCC 882
Query 288447 GGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| ||||| ||||| |||||||||
Sbjct 881 GGTCAAGGTCTTCACGAAGATCTGCATT 854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179446593186822
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