Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq13746 187 3e-42 seq13747 123 3e-23 >seq13746 Length=16180835 Score = 187 bits (206), Expect = 3e-42 Identities = 904/1417 (64%), Gaps = 28/1417 (2%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 ||||| || | ||| |||||| ||| ||||| || ||||| ||||| ||| |||| Sbjct 14158597 AACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGACTCG 14158656 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 |||||||||| || || || || || ||||||||||| || || | | ||| ||| Sbjct 14158657 TTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAGTTT 14158716 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-GT 114093 | || || | | | || ||||| || | | |||||| || || | | | Sbjct 14158717 CTGACTCCATGCTGTTTGATAGACTCCTTCAGAGATTTCCAGTCCCAGA-GACCAGTCGG 14158775 Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153 | | |||||| || |||| || || || | |||| ||| ||| | || Sbjct 14158776 CGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATAAGT 14158835 Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213 || || | || || | |||| |||| | || ||||| |||||| | || || Sbjct 14158836 TTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAGAT 14158895 Query 114214 TGTCTCAAAAATGCGAGCATTCATT-GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 114272 ||| |||||||| | |||| | |||| |||| ||| || | | || || Sbjct 14158896 TGTTTCAAAAATCTGTTGGTTCAAGAGGCTTG-CCTCCTCGCTTTCGTAGG-GATAACGC 14158953 Query 114273 ACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331 | || ||| | | || || || || || ||||||| || || || ||||| |||||| Sbjct 14158954 ATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCATA 14159013 Query 114332 TTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 114391 || ||||| || | || |||||||| || |||| || | | |||| || ||| Sbjct 14159014 TTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGTTT 14159073 Query 114392 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 114451 ||| || |||||||| || | ||||||| | | ||| | | |||| | Sbjct 14159074 CTGGCCACCGTCTTTGTGACCTCCTTTAGCTTTTTGAAGTCATATGTCT---TCTCGGGA 14159130 Query 114452 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 | ||| || | || ||||| || |||| ||| || || | |||| || | Sbjct 14159131 GTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAA 14159190 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 | ||||| | ||||||||| |||| ||| | |||||||||||||| |||| ||| Sbjct 14159191 GAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGG 14159250 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || |||| ||| || || |||||| | |||||||| || | || |||||| ||| Sbjct 14159251 TTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGC 14159310 Query 114632 GACTTGAGAATAGCCTTCCAGACATCGGCGG--CTGGCACAGTGGCGTTGGCTCGCCCCT 114689 |||| | ||||| ||| || | | | || |||||| ||||| || |||| Sbjct 14159311 GACTCAATGATAGCAAACCA--CAAGGACTGTGCTTTCACAGTTCGATTGGCGCGTCCCT 14159368 Query 114690 CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 114749 ||| ||||| || ||||| ||||||||| || ||| | || ||| || | Sbjct 14159369 CCTGTTCGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAG 14159428 Query 114750 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGA 114809 | |||| || || | | ||||| | || |||| || || |||||||||| Sbjct 14159429 GGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGA 14159488 Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 114869 | ||||| ||||| || || |||| | ||| || ||| ||||| | || || Sbjct 14159489 GATCTGGTATCCACAGGGCATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTAT 14159548 Query 114870 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929 | | |||| ||| || | | ||||| ||||| || ||||| || | || | Sbjct 14159549 TCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAA 14159608 Query 114930 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGC 114986 | ||| || | |||| |||| | ||||||| ||| | ||||| || | Sbjct 14159609 AGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTC 14159668 Query 114987 GAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG--ACTTATT 115044 ||||| |||| | |||| ||| |||||| || || | ||| |||| || || Sbjct 14159669 TCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAAT-CGAGGTAC-CCTT 14159726 Query 115045 GGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 115104 || | | ||||| || | ||||||||| || || |||| ||||| ||||| Sbjct 14159727 TGCACGAATGCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGGCGCA 14159786 Query 115105 CTCCGTGAGACTG--CCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAG 115162 | | | | || | | |||| || ||||| ||||| | | | | | ||||| Sbjct 14159787 TTGC-TCA-ACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAAA 14159844 Query 115163 CAGCTCGACATTTGTGGCC--TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 115220 ||| ||||| || || | || ||| ||||| || || ||||| | ||||| Sbjct 14159845 CAGGACGACAGCTGGGGACGATTCGTG--GCAGCGGCAAAAAGTGTTGGCGAAGCGTGAG 14159902 Query 115221 TGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGT 115280 |||| || | ||||| | | ||| ||||||| | | || |||||||| || | Sbjct 14159903 TGAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCAT 14159962 Query 115281 GAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 |||| ||||| | || ||||||| ||||| |||||| Sbjct 14159963 GAATTCCGATTGCCACGCGCATAAGCATGTGTTGGGG 14159999 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 171907 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATT 171966 ||| ||||| ||| | | || || || || ||||| | || || || ||||| || || Sbjct 12128591 ATCCTTGCCGCCCGTCAACCGAGTACCGAACTGACCTCGGGGCTCCAGCAGATTAATGTT 12128532 Query 171967 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 172025 ||| || || | |||| | |||||| || || || || ||| || || || || || | Sbjct 12128531 GTTCGAGCCGACATAGTTCTGGGCCAAGTTTACGATGGTCATCTGC-AGTGACACCTCGC 12128473 Query 172026 CGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCTCAT 172085 ||||||||||||||||| | || || || | | | |||||| || ||||||| || Sbjct 12128472 CGTGATGGTAGGCCGACATCTCGGCCACTGAACCGGACAACTGGGCTACCTTCACTTCGC 12128413 Query 172086 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 172145 ||| ||| | | |||||| | |||||||||| | ||| ||||| | ||| | Sbjct 12128412 GCTTATCGTTTCTCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTCAAGCCAT 12128353 Query 172146 C 172146 | Sbjct 12128352 C 12128352 >seq13747 Length=19884421 Score = 123 bits (136), Expect = 3e-23 Identities = 304/453 (67%), Gaps = 10/453 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || ||| ||| || |||||||| ||||||||||||| ||| ||||||| Sbjct 8706150 GTACTCTCCCACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTCCAT 8706209 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGC-ACCCCAATCTGTTTGAGGAGAC 125876 |||| || ||||| || | ||| | ||| ||| | || || | || | || || | Sbjct 8706210 GAAATTGAAAGGGTTTTTGGTGTTGTAGATT-TTGCCTACGCCCAGCTCTACCAGTAGCC 8706268 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 | |||| || | || ||||| | |||||| || ||||||| ||||| | || | Sbjct 8706269 GGTCCGCCACAAATTCGATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAATT-C 8706327 Query 125937 ATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 | ||| | ||||| || |||| ||| |||||| ||||| || || || | || || Sbjct 8706328 ACGGGCAAGGCGTCGGTGAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAATCTCG 8706387 Query 125996 TGAATGGTGTCCACCCCAGGT--CTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAAC 126052 ||| || | | | | || | || | | || || ||| | ||| || || Sbjct 8706388 ---ATGATGCGCTCGCGACGTGGTTTCTGGACGAGGTGCTGGAACATAAGCACAGCGAAG 8706444 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| ||||| ||||| | |||||| || || || |||||| ||| || ||||| Sbjct 8706445 TCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCGGGCATC 8706504 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 | ||| ||||||||||||||||| || | ||| || |||||| || |||||| Sbjct 8706505 AAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATACCCTCC 8706564 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAG 126205 || || || || | || ||||| ||||| Sbjct 8706565 ACGGCAGCAAATGCGATGATGCGCTCCCCAAAG 8706597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597250937316920