Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq13746 228 8e-55 >seq13746 Length=16180835 Score = 228 bits (252), Expect = 8e-55 Identities = 1006/1565 (64%), Gaps = 67/1565 (4%) Strand=Plus/Minus Query 93722 ATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTT 93781 ||||||||| || |||||||||||| || |||||||| || || |||| | || Sbjct 14160067 ATTACTTTGGGTTTAAAACTCTGGAGCGTTCTTACCTCCTTAAAATAAATGGAAAAGTCG 14160008 Query 93782 CCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGC 93841 ||||||| || || || |||| |||||||| || ||||| ||||| || | ||||| Sbjct 14160007 CCGAGCGGCCCCAACACATGCTTATGCGCGTGGCAATCGGAATTCATGGAGAAGACAT-- 14159950 Query 93842 CGAA--TGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG---GCCAC 93896 ||| || || | | | || || ||| | | || | ||| || || | Sbjct 14159949 CGATGCTGCCGTGGAGACGTACA---ACTTGCTGTCCGAGCGTTATTTCACTCACGCTTC 14159893 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCG----GTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || || || || ||| | || || || || ||| |||| || |||||||| Sbjct 14159892 GCCAACACTTTTTGCCGCTG---CCACGAATCGTCCC-CAGCTGTCGTCCTGTTTCCTCC 14159837 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 |||| | | |||||||||||| || || ||| | | || | || || | | Sbjct 14159836 TGACCATGACTGCCGACTCCATCGAGGGTATCTTCAAATCGGTTGAGCAATGCGCCATGA 14159777 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || | || || || || || | | ||||| | | ||||| | |||| ||| Sbjct 14159776 TCTCCAAGTCTGCTGGTGGTATTGGTCTTAACGTCCATTGCATTCGTGCAAAGGGTACCT 14159717 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 || |||| || |||||||| ||||| ||||| || |||||||| | ||||| |||| Sbjct 14159716 CGATTTGCGGAACGAATGGCACATCCAATGGCCTGGTTCCTATGCTGAGAGTCTTTAACA 14159657 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 ||| |||||| || ||||| ||||||||||| | | || ||| | || || | |||| Sbjct 14159656 ACGTGGCGCGGTATGTGGATCAGGGTGGTGGCAAGCGGCCGGGAGCCTTTGCCATTTATC 14159597 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||||||||| |||| || | || | ||||| ||||| ||||| | Sbjct 14159596 TGGAGCCCTGGCATTCGGATGTATTTGAGTTTCTGGACCTTAAGAAGAATACTGGCAAGG 14159537 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | | ||| | || | ||||| || || ||| | ||||| || || ||||||| Sbjct 14159536 AAGAGCATCGAGCCCGCGATTTGTTCTATGCCCTGTGGATACCAGATCTCTTCATGAAAC 14159477 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTT--TTTGTCCCAATGAATGTCCCGGACTGTC 94370 | || ||| || | ||| ||| || | |||||| || |||| || || || Sbjct 14159476 GAGTGGAGGCCAATGAGGACTG--GTCGTTAATGTGTCCCCATAAATGCCCTGGCCTCCA 14159419 Query 94371 CGACGTTTGTG--GATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428 || || || | ||| | | |||||| | | |||| |||||| | |||| Sbjct 14159418 TGATGTGTGGGGCGAT-GAG-TTTGAAAAACTCTATGTGAAATACGAACAGGAGGGACGC 14159361 Query 94429 GCCA--GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 |||| ||| | || | || | ||||| | ||| | || || |||| Sbjct 14159360 GCCAATCGAA--CTGTGAAAGCACAGTCCTTGTGGTTTGCTATCATTGAGTCGCAAGTGG 14159303 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| || | || ||||| ||||||||||| | |||| ||| |||||| ||| Sbjct 14159302 AGACTGGAAATCCTTACATGCTGTTCAAGGACGCCTGCAACCGAAAGAGCAACCAACAGA 14159243 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 | | || || ||| || ||||||||||| || ||||| |||||| |||| || | Sbjct 14159242 ATGTGGGCACCATTAAGTGCAGCAATCTGTGCACGGAAATTGTTGAGTATTCTTCACCTG 14159183 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666 |||||||||| || || || ||| ||||||| || || || | || || | || Sbjct 14159182 ACGAGATTGCAGTTTGCAATTTGGCCTCCATC--GCTCTCAACATGTTTGTGA-CTCCCG 14159126 Query 94667 ACACGTC-TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725 | | | | || |||| | || ||||| | || || || ||| | Sbjct 14159125 AGAAGACATATGACTTC-AAAAAGCTAAAGGAGGTCACAAA--------GACGG-TGGCC 14159076 Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 ||||| || | | |||| || | ||||| || || | |||||||| |||| || Sbjct 14159075 AGAAACCTCAATAAGATAATAGATATCAACTTTTATCCGCTGCCGGAGGCCAAGAAGTCC 14159016 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 || ||| |||||| || ||||| ||||| || ||||| | || ||||||||| | | Sbjct 14159015 AATATGAGGCATCGTCCTATCGGAATCGGTGTTCAGGGACTGGCTGACGCGCTGATTCTT 14158956 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGG---TTTGAATTTGAACATATTCGAA 94902 |||||| |||||||| ||| | ||| | ||||| | || || ||| Sbjct 14158955 ATGCGTTATCCCTACGA---AAGCGAGGAGGCAAGCCTCTTGAACCAACAGATTTTTGAA 14158899 Query 94903 AGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCC 94961 | || || | || ||| | || | | | ||| | ||| | | | ||| | Sbjct 14158898 ACAATCTACTTTGGAGCCCTGGAGGCCAGTTGCGAACTGGCCCAAA----AAGACGGAAC 14158843 Query 94962 ACACGAATCGTTCCGCGGATCGCCCTTGGAA--CAGGGCATTTTTCAGTTCGACCTCTGG 95019 | ||| | || | | |||| | || |||| ||| | |||| |||| | ||| Sbjct 14158842 TTATGAAAC-TTATGAAGGAAGCCC-AGTAAGTAAGGGAATTCTGCAGTACGACATGTGG 14158785 Query 95020 GGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCT-ACGCGCTGATGTTATCAAA-- 95076 | | | ||| | ||||| | |||||| || |||| | | || ||||||| Sbjct 14158784 GATAAAACGCCGACTGGTCTCTGGGACTGGAAATCTCTGAAG----GAGTCTATCAAACA 14158729 Query 95077 -CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135 || || || | |||| | || | || || || |||||||| || || || || ||||| Sbjct 14158728 GCATGGAGTCAGAAACTCCCTATTGGTTGCTCCGATGCCCACAGCATCGACTGCTCAGAT 14158669 Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195 | || ||||||||||| ||||| |||| ||| | || | || | ||| || || || Sbjct 14158668 TATGGGTAACAACGAGTCCTTCGAGCCCTACACAACAAATATTTATACCAGACGCGTACT 14158609 Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGT 95255 | ||||||| |||| || | ||| | || | || ||||| ||||| |||| | | Sbjct 14158608 CTCCGGGGAGTTCCAAGTGGTTAACCATCATTTGCTGAGGGACTTGACGGAGCTGGATTT 14158549 Query 95256 GTGGG 95260 ||||| Sbjct 14158548 GTGGG 14158544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494638175634040