Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 228 8e-55
>seq13746
Length=16180835
Score = 228 bits (252), Expect = 8e-55
Identities = 1006/1565 (64%), Gaps = 67/1565 (4%)
Strand=Plus/Minus
Query 93722 ATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTT 93781
||||||||| || |||||||||||| || |||||||| || || |||| | ||
Sbjct 14160067 ATTACTTTGGGTTTAAAACTCTGGAGCGTTCTTACCTCCTTAAAATAAATGGAAAAGTCG 14160008
Query 93782 CCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGC 93841
||||||| || || || |||| |||||||| || ||||| ||||| || | |||||
Sbjct 14160007 CCGAGCGGCCCCAACACATGCTTATGCGCGTGGCAATCGGAATTCATGGAGAAGACAT-- 14159950
Query 93842 CGAA--TGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG---GCCAC 93896
||| || || | | | || || ||| | | || | ||| || || |
Sbjct 14159949 CGATGCTGCCGTGGAGACGTACA---ACTTGCTGTCCGAGCGTTATTTCACTCACGCTTC 14159893
Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCG----GTGCCACAGATGTCTTCGTGTTTCCTGA 93952
|| || || || ||| | || || || || ||| |||| || ||||||||
Sbjct 14159892 GCCAACACTTTTTGCCGCTG---CCACGAATCGTCCC-CAGCTGTCGTCCTGTTTCCTCC 14159837
Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
|||| | | |||||||||||| || || ||| | | || | || || | |
Sbjct 14159836 TGACCATGACTGCCGACTCCATCGAGGGTATCTTCAAATCGGTTGAGCAATGCGCCATGA 14159777
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || | || || || || || | | ||||| | | ||||| | |||| |||
Sbjct 14159776 TCTCCAAGTCTGCTGGTGGTATTGGTCTTAACGTCCATTGCATTCGTGCAAAGGGTACCT 14159717
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|| |||| || |||||||| ||||| ||||| || |||||||| | ||||| ||||
Sbjct 14159716 CGATTTGCGGAACGAATGGCACATCCAATGGCCTGGTTCCTATGCTGAGAGTCTTTAACA 14159657
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
||| |||||| || ||||| ||||||||||| | | || ||| | || || | ||||
Sbjct 14159656 ACGTGGCGCGGTATGTGGATCAGGGTGGTGGCAAGCGGCCGGGAGCCTTTGCCATTTATC 14159597
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
| ||||||||||| |||| || | || | ||||| ||||| ||||| |
Sbjct 14159596 TGGAGCCCTGGCATTCGGATGTATTTGAGTTTCTGGACCTTAAGAAGAATACTGGCAAGG 14159537
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| | | | ||| | || | ||||| || || ||| | ||||| || || |||||||
Sbjct 14159536 AAGAGCATCGAGCCCGCGATTTGTTCTATGCCCTGTGGATACCAGATCTCTTCATGAAAC 14159477
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTT--TTTGTCCCAATGAATGTCCCGGACTGTC 94370
| || ||| || | ||| ||| || | |||||| || |||| || || ||
Sbjct 14159476 GAGTGGAGGCCAATGAGGACTG--GTCGTTAATGTGTCCCCATAAATGCCCTGGCCTCCA 14159419
Query 94371 CGACGTTTGTG--GATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428
|| || || | ||| | | |||||| | | |||| |||||| | ||||
Sbjct 14159418 TGATGTGTGGGGCGAT-GAG-TTTGAAAAACTCTATGTGAAATACGAACAGGAGGGACGC 14159361
Query 94429 GCCA--GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486
|||| ||| | || | || | ||||| | ||| | || || ||||
Sbjct 14159360 GCCAATCGAA--CTGTGAAAGCACAGTCCTTGTGGTTTGCTATCATTGAGTCGCAAGTGG 14159303
Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546
|||| || | || ||||| ||||||||||| | |||| ||| |||||| |||
Sbjct 14159302 AGACTGGAAATCCTTACATGCTGTTCAAGGACGCCTGCAACCGAAAGAGCAACCAACAGA 14159243
Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606
| | || || ||| || ||||||||||| || ||||| |||||| |||| || |
Sbjct 14159242 ATGTGGGCACCATTAAGTGCAGCAATCTGTGCACGGAAATTGTTGAGTATTCTTCACCTG 14159183
Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666
|||||||||| || || || ||| ||||||| || || || | || || | ||
Sbjct 14159182 ACGAGATTGCAGTTTGCAATTTGGCCTCCATC--GCTCTCAACATGTTTGTGA-CTCCCG 14159126
Query 94667 ACACGTC-TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725
| | | | || |||| | || ||||| | || || || ||| |
Sbjct 14159125 AGAAGACATATGACTTC-AAAAAGCTAAAGGAGGTCACAAA--------GACGG-TGGCC 14159076
Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785
||||| || | | |||| || | ||||| || || | |||||||| |||| ||
Sbjct 14159075 AGAAACCTCAATAAGATAATAGATATCAACTTTTATCCGCTGCCGGAGGCCAAGAAGTCC 14159016
Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845
|| ||| |||||| || ||||| ||||| || ||||| | || ||||||||| | |
Sbjct 14159015 AATATGAGGCATCGTCCTATCGGAATCGGTGTTCAGGGACTGGCTGACGCGCTGATTCTT 14158956
Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGG---TTTGAATTTGAACATATTCGAA 94902
|||||| |||||||| ||| | ||| | ||||| | || || |||
Sbjct 14158955 ATGCGTTATCCCTACGA---AAGCGAGGAGGCAAGCCTCTTGAACCAACAGATTTTTGAA 14158899
Query 94903 AGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCC 94961
| || || | || ||| | || | | | ||| | ||| | | | ||| |
Sbjct 14158898 ACAATCTACTTTGGAGCCCTGGAGGCCAGTTGCGAACTGGCCCAAA----AAGACGGAAC 14158843
Query 94962 ACACGAATCGTTCCGCGGATCGCCCTTGGAA--CAGGGCATTTTTCAGTTCGACCTCTGG 95019
| ||| | || | | |||| | || |||| ||| | |||| |||| | |||
Sbjct 14158842 TTATGAAAC-TTATGAAGGAAGCCC-AGTAAGTAAGGGAATTCTGCAGTACGACATGTGG 14158785
Query 95020 GGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCT-ACGCGCTGATGTTATCAAA-- 95076
| | | ||| | ||||| | |||||| || |||| | | || |||||||
Sbjct 14158784 GATAAAACGCCGACTGGTCTCTGGGACTGGAAATCTCTGAAG----GAGTCTATCAAACA 14158729
Query 95077 -CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135
|| || || | |||| | || | || || || |||||||| || || || || |||||
Sbjct 14158728 GCATGGAGTCAGAAACTCCCTATTGGTTGCTCCGATGCCCACAGCATCGACTGCTCAGAT 14158669
Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195
| || ||||||||||| ||||| |||| ||| | || | || | ||| || || ||
Sbjct 14158668 TATGGGTAACAACGAGTCCTTCGAGCCCTACACAACAAATATTTATACCAGACGCGTACT 14158609
Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGT 95255
| ||||||| |||| || | ||| | || | || ||||| ||||| |||| | |
Sbjct 14158608 CTCCGGGGAGTTCCAAGTGGTTAACCATCATTTGCTGAGGGACTTGACGGAGCTGGATTT 14158549
Query 95256 GTGGG 95260
|||||
Sbjct 14158548 GTGGG 14158544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494638175634040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |