Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq13749 102 6e-17 >seq13749 Length=23697760 Score = 102 bits (112), Expect = 6e-17 Identities = 176/254 (69%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 108342 CGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCA- 108400 ||| || || | ||||| || |||||||| ||||| | || || |||||||| || | Sbjct 1663156 CGGTTTGGGCATCACGGCTGGAGTCCATCGTCTGTGGTCGCATAAGGCCTACAAAGCAAA 1663215 Query 108401 -CCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | || | | ||||| ||| ||| ||| |||| ||||||| |||| Sbjct 1663216 GCTGCCTC--TCCGCATCTTCCTCATGCTGTGCCAGTCGCTGGCCTTCCAGAACAGCATC 1663273 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||| | |||||| | || |||||||||| | | ||||| ||||| || Sbjct 1663274 TGGGAGTGGACCCGTGATCACCGTGTCCACCACAAGTTCACCGACACACACGCCGATCCC 1663333 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||| || | || |||| ||| | ||| |||||||||| ||| | ||| || Sbjct 1663334 CACAACTCCCGTCGCGGTTTCTTTTTCGCCCACATGGGATGGCTGATGTGCAAGAAGCAC 1663393 Query 108580 CCCGACGTGATCTC 108593 |||||||||| ||| Sbjct 1663394 CCCGACGTGACCTC 1663407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | || || | || |||||||||||||| || ||| ||||| || ||||| Sbjct 21047090 TGGGTTCGTGACCATCGAGTCCACCACAAGTACTCGGAGACGGATGCCGATCCGCACAAT 21047031 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 |||||| | || |||| ||||| |||||||| ||||| |||||| ||| | || || Sbjct 21047030 GCCAACCGTGGATTCTTCTTCTCCCACGTGGGCTGGCTGATGATGTTGAAGCATCCGGAA 21046971 Query 108586 GTGATCTCGGC-CGGTCGAAAAATGGACATGACGGACAT 108623 || || || | |||||| | || |||||| |||| || Sbjct 21046970 GTTCTC-CGTCGCGGTCGTCAGATCGACATGTCGGATAT 21046933 Score = 89.7 bits (98), Expect = 4e-13 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 108862 AACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTC 108921 ||||| ||||| | | ||| | ||||||||||||||||||||||||||||||| ||| Sbjct 1663742 AACAAGCTGGTGTCCACTTTGACCATCGGCGAGGGATGGCACAACTACCACCACGTCTTC 1663801 Query 108922 CCCTACGACTACAAGGCCGCCGAG-TTGG 108949 |||| ||||||||||| || ||| |||| Sbjct 1663802 CCCTGGGACTACAAGGCAGCTGAGCTTGG 1663830 Score = 82.4 bits (90), Expect = 6e-11 Identities = 70/86 (81%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 108887 TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGT 108946 |||||||||| ||||| |||||||||||||| ||||||| ||||||||| | ||||||| Sbjct 7653910 TCGGCGAGGGCTGGCATAACTACCACCACGTCTTCCCCTGGGACTACAAGACGGCCGAGT 7653969 Query 108947 TGGGGAACGACT---TTAATTTCACC 108969 | || || ||| | || |||||| Sbjct 7653970 TCGGCAAATACTCTCTAAACTTCACC 7653995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381708827882856