Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq13747 147 3e-30 >seq13747 Length=19884421 Score = 147 bits (162), Expect = 3e-30 Identities = 487/750 (65%), Gaps = 27/750 (4%) Strand=Plus/Plus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||| || || ||||||||||| || |||| || || |||||||| ||| Sbjct 8706159 CACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTCCATGAAATTGAA 8706218 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 ||||| || || ||| || | || || | |||| | || ||| ||||| Sbjct 8706219 AGGGTTTTTGGTGTTGTAGATTTTGCCTACGCCCAGCTCTACCAGTAGCCGGTCCGCCAC 8706278 Query 159763 AAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGC 159822 |||||||||||| ||||| || ||||| || || | || | ||||| | || Sbjct 8706279 AAATTCGATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAATTCACGGGCAAGGC 8706338 Query 159823 TTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGA-GACACGTT 159881 || | || ||||||| |||||| || || || ||| | ||||| ||| || || | Sbjct 8706339 GTCGGTGAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAATCT-CGATGATGCGCT 8706397 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCAC-GCAAAGTCGCAGTGC 159940 || | || || | | | ||| || |||| || ||| || |||||||||||| Sbjct 8706398 CGCGACGTGGTTT---CTGGACGAGGTGCTGGAACATAAG-CACAGCGAAGTCGCAGTGC 8706453 Query 159941 AGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGC 160000 || || ||||||| ||||| | ||||||||| | | | || || ||||| | || ||| Sbjct 8706454 AGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCGGGCATCAAACCTCGC 8706513 Query 160001 GGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCA 160060 || | ||| || || | ||||| ||||| || || || ||||||||||| ||| Sbjct 8706514 TTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATACCCTCCACGGCAGCA 8706573 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGG-TGTCATGG-----GTCCACCTTTTG 160114 || || | || | ||| ||||| ||||| || | | | |||| Sbjct 8706574 AATGCGATGATGCGCTCCCCAAA------GTTGGCTGACTTCGAAGAAATCCAGGCCAGA 8706627 Query 160115 GCCCATTCAGCCTTCTTTGCGATGCAC----GGCATGCGCTCGACGGCGTTAAACAATCT 160170 ||||| || ||| ||||| | ||| ||||| ||| | ||| || |||| Sbjct 8706628 GCCCAATCTGCC----TTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGAACAGGTA 8706683 Query 160171 GTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTG 160230 || ||| | ||| || |||| | || ||| |||||| || | ||| Sbjct 8706684 TTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATCTCAGAGTG 8706743 Query 160231 CACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTC 160290 ||| ||||| ||||| || || || ||||||| | ||||||| ||| ||||| Sbjct 8706744 CACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCTGAACCTC 8706803 Query 160291 CTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGC 160350 ||| |||| | | |||| || | || || | || || | || |||||||| || Sbjct 8706804 CTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCAAAGAAGGC 8706863 Query 160351 CAACACGTGAGAGATGAAATGTCTCTCGTC 160380 || |||||| |||||||| || | ||||| Sbjct 8706864 CAGCACGTGGGAGATGAAGTGGCGTTCGTC 8706893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795018542639440