Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq13749 161 7e-34 seq13737 152 4e-31 >seq13749 Length=23697760 Score = 161 bits (178), Expect = 7e-34 Identities = 680/1062 (64%), Gaps = 19/1062 (2%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||| || ||||| || |||||||| || ||||| || || ||||| ||||||| || || Sbjct 7675784 GGCGGTAACATTCAGGATACCATTAGCGTCCAAGTCGAAGGTGACGTCAATTTTTGGCAC 7675725 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 ||||| | ||||||||||| || || || ||||| || || ||| || || || Sbjct 7675724 GCCTCTGGGTGCAGGTGGGATGCCAGTCAGGTTGAATGTGCCAAGCACATTGTTGTCCTT 7675665 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 ||| || || || |||||||| | |||||||| || ||| ||||||||||| || Sbjct 7675664 AGTCAAGGCACGCTCTCCCTCGAAGACCTGGATAGTTACCGCAGGTTGATTATCTGCGTA 7675605 Query 517438 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || || || |||| | || |||||||| |||| | ||||| | ||||| Sbjct 7675604 TGTGGTGAAGGTCTTGGACTGCTTGCAAGGAATGCGGCTGTTGCGCTCAATCAGCTTGGT 7675545 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG---GAC 517554 ||| | || || || || || | || | || || |||| ||||| || || ||| Sbjct 7675544 CATCACTCCGCCGGCAGTCTCGATGCCCAATGATAGCGGAGCCACATCCACCAGCAAGAC 7675485 Query 517555 AATATTT-TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 517613 | ||| | | | || ||| | || |||||| ||||| ||||| || || | Sbjct 7675484 ATCCTTTATCTGGCTGCTC-TCA---TCGCCGGAAAGAATGGCTGCCTGAATTGCCGCTC 7675429 Query 517614 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 517673 |||| || || |||||||||||||| | | |||||| | || || || || Sbjct 7675428 CATAGGCCACCGCTTCATCAGGATTGATGGACAGATTTAGAGTCTTTCCGCCAAAGAAGC 7675369 Query 517674 TTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732 || || | ||| ||||| ||||| || | |||||||| || | ||||| ||| Sbjct 7675368 CCTGCAGCAGAT-TCTGAACCTTGGGAATGCGGGTGGATCCTCCTACCAGAACAATATCA 7675310 Query 517733 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCC 517792 || | ||| ||| |||| || | ||| | | ||||| ||||| | || Sbjct 7675309 TGAATCTGGCCTTTGTCCATCTTGGCATCGTTCAGGGCCTTTTCCACGGGCTGCAGTGTA 7675250 Query 517793 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA 517852 | || | ||| || | || ||||| |||| | | || | | Sbjct 7675249 TTGCGGAAGAGATCTCCGCACAACTCCTCGAACCGGGCTCGGCTCACCTTGGTGTAGAAG 7675190 Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 ||| || ||||| | | ||||| || || | || | ||| ||| || | || Sbjct 7675189 TCATGACCCTCGAAGAGGGCATCAATCTCTATGGAAGCCTCAGTGCTAGAGGACAATGTG 7675130 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCA 517970 || || || ||||| ||| || | ||| | || | || | ||||| | || Sbjct 7675129 CGCTTGGCGCGTTCGGCTGCAGTTCGTAGGCGTCTCAGAGC--ACGAGGATTGGAACGCA 7675072 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCA 518029 ||| | ||| | || | |||||| ||||| | || ||| || || || || ||| Sbjct 7675071 GATCCTTCTTAAACTTCCGCTTGAACTCTTCTGC-CAGATGGTTCACCAGCCGGTTGTCA 7675013 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCA 518086 || || || || |||| | ||| | || | |||| | || | |||||| ||| Sbjct 7675012 AAGTCCTCGCCACCCAGATGAGTGTCGCCAGCTGTAGACCGCACCTCGAAAAGAGATCCT 7674953 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 || || | || ||||| | || || || || ||||||| || || || || ||| Sbjct 7674952 TCGTCGATAGTCAAAATGGAGACGTCGAAAGTGCCGCCACCCAAGTCGAAGATGAGCACA 7674893 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 || ||| | ||||||| || || || || || | || || ||||| || || Sbjct 7674892 TTGCGCTCTCCCTTAAGGTTTTTGTCGAGTCCGTAGGCCAGGGCTGCGGCAGTGGGCTCG 7674833 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 || || || | | ||||| | |||||||| ||| ||||| || ||||| || | Sbjct 7674832 TTGATTATGCGAAGGACATTTAATCCAGCAATCGCTCCCGCATCCTTGGTGGCCTGGCGC 7674773 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 || || ||||||||||| || || || ||||| || |||||| Sbjct 7674772 TGGGAGTCGTTAAAATAGGCCGGCACCGTAATGACTGCATCA 7674731 >seq13737 Length=3535662 Score = 152 bits (168), Expect = 4e-31 Identities = 457/703 (65%), Gaps = 2/703 (0%) Strand=Plus/Plus Query 518012 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 518071 || || ||||| || ||||| || || |||||||| | || | || | || | | | Sbjct 184033 GTGACTAGACGGTTGTCAAAGTCCTCGCCTCCCAAATGCGTGTCACCGGCAGTGGATTTG 184092 Query 518072 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131 || | ||| | || || || | |||| || | ||||| ||| || || |||| | Sbjct 184093 ACCTCGAAGATGCCGTCATCGATCGACAGAATGGACACATCGAAGGTGCCGCCGCCCAGA 184152 Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 518191 || ||||| || || || || | || || || ||||| || |||| |||| Sbjct 184153 TCGAAAATGAGCACGTTGCGCTCGCCAACGGCCTTCTTGTCCAGACCGTAAGCAATAGCA 184212 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 || || || || || || || || | || |||||| | || ||||| | || || || Sbjct 184213 GCGGCCGTGGGCTCGTTGATGATACGCAGAACATTCAATCCGGCAATGGTACCGGCGTCC 184272 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311 || || || || | || || ||||| || || || || ||||| || ||||||| || Sbjct 184273 TTGGTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACAGTGATGACGGCATTGGTC 184332 Query 518312 ACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAA 518371 || || || | ||| || || || | ||||| || | | | ||| || || Sbjct 184333 ACAGTCTTGCCCAGATAGGCCTCGGCGGTCTCCTTCATCTTGGTGAGGACCATAGAGGAG 184392 Query 518372 ATTTGTTCTGGGGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 518430 || | || |||||| | | ||| |||| | || | || || | | || || Sbjct 184393 ATCTCCTC-GGGGAAGAAGGTCTTCTTCTCATCCTTGTAGGTGACCTCGATCTTGGGCTT 184451 Query 518431 ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTC 518490 |||| | | ||| | || ||||||| ||||| || || || ||| || Sbjct 184452 GCCGTCAACGCTGACAACCTCGAAGGGCCAGTGCTTCATGTCGGACTGCACAGCAGAATC 184511 Query 518491 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC 518550 | || | | |||||| | || || ||||| || || || | ||| || || || || Sbjct 184512 GTCGAACTTGCGACCAATGAGACGCTTAGCATCGAAGATCGTCTGGGTCGGGTTCATCGC 184571 Query 518551 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 518610 | || | ||||| ||||| || |||||| | || ||||| || || | |||||| || Sbjct 184572 CACCTGGTTCTTGGCAGCATCGCCGATCAGACGCTCCGTCTCGGTGAAGGCAACATAGGA 184631 Query 518611 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 518670 ||| || || |||||||| || || || ||||| || ||||| || |||| || | || Sbjct 184632 TGGTGTGGTACGATTACCCTGGTCGTTGGCAATGATCTCAACCTTGCCATGCTGGAACAC 184691 Query 518671 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 || ||||| | || || || ||||||||||||| |||| Sbjct 184692 GCCCACACAGGAGTAGGTGGTGCCCAAATCAATACCAACAGCA 184734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780140129330794