Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq13746 102 1e-16 >seq13746 Length=16180835 Score = 102 bits (112), Expect = 1e-16 Identities = 951/1527 (62%), Gaps = 48/1527 (3%) Strand=Plus/Plus Query 109401 CTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCAT 109460 ||| | ||| | || ||||| || ||||| |||||||| ||||| | ||| | ||| || Sbjct 14158272 CTTTGTGCGCAAGTAGTACATTCCGGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAAT 14158331 Query 109461 TGAAGAGAG-TTTGGAAAGTGTCGGACTCT-CCATAAACAAGTTCATCGACTGAGACTGA 109518 || | ||| ||| | ||| | | |||| ||| | | || | ||||| |||| Sbjct 14158332 GGATGTGAGCTTTCCATAGTTTGG--CTCTGCCACATGGATATTGAAGGACTGGCTCTGA 14158389 Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA--TTTCCC 109576 || || || ||| |||||||| ||||| | ||| | | ||| || | |||||| Sbjct 14158390 TCTATAAACGCACCGCGATCAGCGGCCATTTTAATGGTTGA--TTTCACTGAGATTTCCC 14158447 Query 109577 AGACAGTCTTGTACAAATTCTTGATA-TCATCGGGAATGTCCACGATGTTTTGAATAGAG 109635 | || || ||||| || || || | | ||||||| | || ||||||||||| Sbjct 14158448 ATACTGTTTTGTA-AAGGTCGCGAACCTTTTGGGGAATGGATTCAATATTTTGAATAGAT 14158506 Query 109636 CCACCAGCCTTC-ACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694 || || || | || ||| |||||| || | ||| | | | | || | | Sbjct 14158507 CC-CCTGCTGGAGATTATCTGATTCTTCATGTCATCGTCCCACAAATCCAGCTCCGTCAA 14158565 Query 109695 ATCG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGT 109753 || ||| ||| ||| | ||| ||||| || || || | ||| ||||| | | Sbjct 14158566 GTCCCTCAGCAA-ATGATGGTTAACCACTTGGAACTCCCCGGAGAGTACGCGTCTGGTAT 14158624 Query 109754 AGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAG 109813 | || || || |||||||| ||||| |||| ||||| || | || || ||||| || | Sbjct 14158625 AAATATTTGTTGTGTAGGGCTCGAAGGACTCGTTGTTACCCATAATCTGAGCAGTCGATG 14158684 Query 109814 CTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCAC 109873 |||||||||| ||||| | | || ||||| || || | | || | ||| Sbjct 14158685 CTGTGGGCATCGGAGCAACCAATAGGGAGTTTCTGACTCCATGCTGTTTGATAGACTCCT 14158744 Query 109874 GCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTT 109933 || | | ||| || | ||||| | | | ||||||||| || | Sbjct 14158745 TCAGAGATTTCCAGTCCCAGAGACCAGTCGGCGTTTT------ATCCCACATGTCGTACT 14158798 Query 109934 GAAGTACACCCTCAGCAGCAGGAGAACCCTTGA-AACTCTCGTACGACCCCTCAACCTCG 109992 | || | |||| | | || | |||| | || | || || | || || | | Sbjct 14158799 GCAGAATTCCCTTACTTACTGG-GCTTCCTTCATAAGTTTCATAAGTTCCGTCTTTTTGG 14158857 Query 109993 GCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTC 110052 |||| ||| | ||||| || || || || || || |||||||| || ||| Sbjct 14158858 GCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAGATTGTTTCAAAAATCTGTTGGTTC 14158917 Query 110053 ATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGA 110112 | ||||| | ||| || | ||| ||||| || |||||| | | | || || || Sbjct 14158918 AAGAGGCTTGCCTCCTCGCTTTCGTAGGGATAACGCATAAGAATCAGCGCGTCAGCCAGT 14158977 Query 110113 CCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGA-------GCGTCGAGCAGT 110165 ||||||||||||| || || || |||||| |||| || || || || |||| Sbjct 14158978 CCCTGAACACCGATTCCGATAGGACGATGCCTCATATTGGACTTCTTGGCCTCCGGCAG- 14159036 Query 110166 TTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGT 110225 || ||||||||| || || | | |||||| || | | ||| ||||| || Sbjct 14159037 ------CGGATAAAAGTTGATATCTATTATCTTATTGAGGTTTCTGGCCACCGTCTTTGT 14159090 Query 110226 GATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAG 110285 || || | || || | | | || | | || |||| | | ||| | || ||| Sbjct 14159091 GACCTCCTTTAGCTTTTTGAAGTCATA---TGTCTTCTCGGGAGTCACAAACATGTTGAG 14159147 Query 110286 AGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTC 110345 ||| || || || | |||||| || | | ||||||| | || || | |||||| Sbjct 14159148 AGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAAGAATACTCAACAATTTC 14159207 Query 110346 CGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT-CGATTTGGAGTTGC 110404 ||| |||| ||| | ||||||| |||| |||| || || | ||| | ||||| Sbjct 14159208 CGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCG-GTTGC 14159266 Query 110405 ATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCT 110464 | || ||||| | |||||||| || | ||||| ||| || |||| | || || Sbjct 14159267 AGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAA 14159326 Query 110465 TCCATACATCGGC--GGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGT 110522 || ||| | | || |||||| || ||| | || |||| ||||| || Sbjct 14159327 ACC--ACAAGGACTGTGCTTTCACAGTTCGATTGGCGCGTCCCTCCTGTTCGTATTTCAC 14159384 Query 110523 GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACA 110582 || | | ||||| || | || |||||||| || || || | |||||| Sbjct 14159385 ATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAGGGCATTTATGGGGACA 14159444 Query 110583 GAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACAT 110642 | | ||||| | || |||| || | |||||||| || || || ||||||| Sbjct 14159445 CATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAG 14159504 Query 110643 CGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAA 110702 || |||| | || ||| ||| |||||| | || || || |||| Sbjct 14159505 GGCATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTATTCTTCTTAAGGTCCAG 14159564 Query 110703 AAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG--- 110759 ||| || | | |||||| ||||| || || ||||| | || | || |||| || Sbjct 14159565 AAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTT 14159624 Query 110760 ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAAT 110819 | ||| |||| | ||||| || || | || ||||| || |||||||||| | Sbjct 14159625 GCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAG 14159684 Query 110820 TCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGAT 110879 |||| |||| ||||| || || | ||| || || ||||||||| |||| Sbjct 14159685 GCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTTTGCACGAATGCAATGGAC 14159744 Query 110880 ATGCATACCAATACCACCCGCCCACTT 110906 | | |||||||||||| || |||| Sbjct 14159745 GTTAAGACCAATACCACCAGCAGACTT 14159771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588874777112200