Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq13746 140 3e-28 >seq13746 Length=16180835 Score = 140 bits (154), Expect = 3e-28 Identities = 309/460 (67%), Gaps = 10/460 (2%) Strand=Plus/Plus Query 29761 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCC 29820 ||| |||| ||||| | ||||| | || || || || || || |||||||||| Sbjct 795576 AGTTTGGGGAAGGGCCGCGGCTCGCGTTCAAGTTGCTCCTGAAGTGGCTCCACGTGATTT 795635 Query 29821 AGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29880 ||||| || || | |||||||| ||||| || || || || || | ||| || ||||| Sbjct 795636 AGGTATACATGCGTGTCTCCCATAGTGTGTACGAAGTCACCAGGCTTTAGACCAGTGACA 795695 Query 29881 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 29940 || || ||||| || || | | | ||| ||| ||||| |||||||| || || ||| Sbjct 795696 TGGGCGATCATATAGGTCAACAAGGCATAGGAGGCAATGTTGAAGGGTACACCCAGGCCC 795755 Query 29941 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC-------ACGTA 29993 ||||| | | || || ||||| || ||||| || ||| ||||| || || Sbjct 795756 ATGTCGGCGCTTCGTTGATACAGCTGGCAGGAGAGTTCGCCG-CGCTCCTGAGAGACATA 795814 Query 29994 AAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCA 30053 ||||||| || | |||||||||||| | ||||| | ||| || ||||| Sbjct 795815 AAACTGAGCCAAGCAGTGGCACGGAGGCAATGCCATTTTTGGAATGTCCAGAGGATTCCA 795874 Query 30054 GGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTG 30113 || ||| |||||| || || || || || ||| | || ||| | | | | | Sbjct 795875 CGCCGACATGATGATCCGTCTATCCGAAGGATTCTTCTTTATCGTGTCAATGACATGCTT 795934 Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGA 30172 || ||||| | ||| | || |||||| | | || || || || || || || | Sbjct 795935 TAGTTGATCGATACCCTTTCCACGGTAGTCATCGTCACAGGTA-GTATATTCGGCGCCAA 795993 Query 30173 AATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30212 | |||| ||| ||||| ||||||||||| |||| |||||| Sbjct 795994 AGTGCCGCCATTGGAAACCGTACACCGGGCCCAAGTCTCC 796033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408549129608777