Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 140 3e-28
>seq13746
Length=16180835
Score = 140 bits (154), Expect = 3e-28
Identities = 309/460 (67%), Gaps = 10/460 (2%)
Strand=Plus/Plus
Query 29761 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCC 29820
||| |||| ||||| | ||||| | || || || || || || ||||||||||
Sbjct 795576 AGTTTGGGGAAGGGCCGCGGCTCGCGTTCAAGTTGCTCCTGAAGTGGCTCCACGTGATTT 795635
Query 29821 AGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29880
||||| || || | |||||||| ||||| || || || || || | ||| || |||||
Sbjct 795636 AGGTATACATGCGTGTCTCCCATAGTGTGTACGAAGTCACCAGGCTTTAGACCAGTGACA 795695
Query 29881 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 29940
|| || ||||| || || | | | ||| ||| ||||| |||||||| || || |||
Sbjct 795696 TGGGCGATCATATAGGTCAACAAGGCATAGGAGGCAATGTTGAAGGGTACACCCAGGCCC 795755
Query 29941 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC-------ACGTA 29993
||||| | | || || ||||| || ||||| || ||| ||||| || ||
Sbjct 795756 ATGTCGGCGCTTCGTTGATACAGCTGGCAGGAGAGTTCGCCG-CGCTCCTGAGAGACATA 795814
Query 29994 AAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCA 30053
||||||| || | |||||||||||| | ||||| | ||| || |||||
Sbjct 795815 AAACTGAGCCAAGCAGTGGCACGGAGGCAATGCCATTTTTGGAATGTCCAGAGGATTCCA 795874
Query 30054 GGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTG 30113
|| ||| |||||| || || || || || ||| | || ||| | | | | |
Sbjct 795875 CGCCGACATGATGATCCGTCTATCCGAAGGATTCTTCTTTATCGTGTCAATGACATGCTT 795934
Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGA 30172
|| ||||| | ||| | || |||||| | | || || || || || || || |
Sbjct 795935 TAGTTGATCGATACCCTTTCCACGGTAGTCATCGTCACAGGTA-GTATATTCGGCGCCAA 795993
Query 30173 AATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30212
| |||| ||| ||||| ||||||||||| |||| ||||||
Sbjct 795994 AGTGCCGCCATTGGAAACCGTACACCGGGCCCAAGTCTCC 796033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408549129608777
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |