Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq13748 104 2e-17
seq3328 104 2e-17
seq3735 89.7 4e-13
>seq13748
Length=23293914
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || || || ||||| || || || || |||||||| || |
Sbjct 9536537 CCGCCTCGCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 9536478
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | ||||| || || || ||||||||||| || || || ||
Sbjct 9536477 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGG 9536418
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || || |||||||| || || || | || | || ||||| | |||||
Sbjct 9536417 ATTCCCTCCTTGTCTTGAATCTTGGCCTTCACGTTCTCGATGGTATCAGAGGGCTCCACC 9536358
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| ||||| || || || ||||| ||||| ||||||||
Sbjct 9536357 TCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 9536311
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || || || ||||| || || || || |||||||| || |
Sbjct 9536765 CCGCCTCGCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 9536706
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | ||||| || || || ||||||||||| || || || ||
Sbjct 9536705 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGG 9536646
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || || |||||||| || || || | || | || ||||| | |||||
Sbjct 9536645 ATTCCCTCCTTGTCTTGAATCTTGGCCTTCACGTTCTCGATGGTATCAGAGGGCTCCACC 9536586
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || || ||||| || || ||||| || ||||||||
Sbjct 9536585 TCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATCTGCAT 9536539
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||||||| || || || || || ||||| || | | || | | |||| ||
Sbjct 9537203 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 9537144
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||||||||| || || || || || || || || || ||
Sbjct 9537143 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 9537084
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || ||| || | || | ||||| || | ||||| || || |||| |||||
Sbjct 9537083 ATCTTGGCTTTGACGTTCTCAATGGTGTCGGAGGGCTCCACCTCCAGGGTGATGGTTTTT 9537024
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || ||||| || || ||||||||
Sbjct 9537023 CCAGTCAAGGTTTTCACGAAGATCTGCAT 9536995
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||||||| ||||| || || || ||||| || | | || | | |||| ||
Sbjct 9538115 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 9538056
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||||||||| || || || || || || || || |||||
Sbjct 9538055 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGG 9537996
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || || || | || || || || |||| |||||
Sbjct 9537995 ATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCAACCTCCAGGGTGATGGTTTTT 9537936
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || ||||| || ||||||||
Sbjct 9537935 CCGGTCAAGGTCTTTACGAAGATCTGCAT 9537907
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
||||||| | | ||| | || ||||| || || || || || || || ||||| || |
Sbjct 9538819 TTCCTCCGCGCAGACGGAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 9538760
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| || | | |||| || | ||||| || || || ||||||||||| || || || |
Sbjct 9538759 ACAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGG 9538700
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| || || || || || ||||| || || || | || | ||||| || | || |
Sbjct 9538699 GGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTCTCGATGGTGTCGGAGGGCTCAA 9538640
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||| || |||| || || ||||| || || ||||| || ||||||||
Sbjct 9538639 CTTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATCTGCAT 9538591
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||||||| || || || || || ||||| || | | ||||| | |||| ||
Sbjct 9537887 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGAGTTCGGCCATCCTCG 9537828
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||||||||| || || || || || || || || || ||
Sbjct 9537827 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 9537768
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || || || | || || || || |||| || ||
Sbjct 9537767 ATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCAACCTCCAGGGTGATGGTCTTT 9537708
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || ||||| || ||||||||
Sbjct 9537707 CCGGTCAAGGTCTTTACGAAGATCTGCAT 9537679
>seq3328
Length=1182
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||||| | ||| | || || || ||||| || || || || |||||||| || |
Sbjct 681 CCTCCTCGCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 622
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| | |||| || | ||||| || || || ||||||||||| || || || ||
Sbjct 621 AGAGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGG 562
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || || || ||||| || || || | || | || || || | || |||
Sbjct 561 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCAACT 502
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || || ||||| || || ||||| || ||||||||
Sbjct 501 TCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATCTGCAT 455
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||||||| || || || || || ||||| || | | ||||| | |||| ||
Sbjct 435 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGAGTTCGGCCATCCTCG 376
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||||||||| || || || || || || || || |||||
Sbjct 375 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGG 316
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||||| || | || ||||| || |||| || ||
Sbjct 315 ATCTTGGCCTTCACGTTCTCGATGGTGTCGGAGGGCTCAACTTCCAGGGTGATGGTCTTT 256
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || || || || ||||||||
Sbjct 255 CCGGTCAAGGTCTTCACGAAGATCTGCAT 227
>seq3735
Length=1215
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||||||| ||||| || || || ||||| || | | || | | |||| ||
Sbjct 379 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 320
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||||||||| || || || || || || || || |||||
Sbjct 319 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGG 260
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || || || | || || || || |||| || ||
Sbjct 259 ATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCAACCTCCAGGGTGATGGTCTTT 200
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || ||||| || ||||||||
Sbjct 199 CCGGTCAAGGTCTTTACGAAGATCTGCAT 171
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||||| | ||| | || || || ||||| || || || || || ||||| || |
Sbjct 625 CCTCCTCGCAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAC 566
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | ||||| || || || ||||||||||| || || || ||
Sbjct 565 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGG 506
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || || ||||| || || || || | || | ||||| || | || |||
Sbjct 505 ATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGAGGGCTCAACT 446
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || || ||||| || || || || || ||||||||
Sbjct 445 TCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTCACGAAGATCTGCAT 399
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/210 (70%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAAT-CGGCGATAGTTCTGGCATCGTC 101319
|| || |||||||| ||||| ||||| ||||| |||| | | | || | | |||| ||
Sbjct 1064 ACCAAGTGAAGGGTGGATTCCTTTTGGATATTTTAATTCCGACAGGGTGCGGCCATCCTC 1005
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || || || ||||||||||| || || || || || || || || || ||
Sbjct 1004 GAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGTTCTGGGGGGATTCCCTCCTTGTCCTG 945
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
|| || || || | || | || || || | || || || || |||| |||||
Sbjct 944 GATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCAACCTCCAGGGTGATGGTTTT 885
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || || || || ||||||||
Sbjct 884 TCCGGTCAAGGTCTTCACGAAGATCTGCAT 855
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||||||| || || || || || ||||| || | | || | | |||| ||
Sbjct 835 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 776
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||||||||| || || || || || || || || |||||
Sbjct 775 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGG 716
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || || || | || || || || |||| || ||
Sbjct 715 ATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCAACCTCCAGGGTGATGGTCTTT 656
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || ||||| || ||||||||
Sbjct 655 CCGGTCAAGGTCTTTACGAAGATCTGCAT 627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396211997238393
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |