Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq13747 123 3e-23 >seq13747 Length=19884421 Score = 123 bits (136), Expect = 3e-23 Identities = 175/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 197037 AAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGATTGTAACAGGC 197096 ||| || || || || || || |||| | ||| || ||| |||| || ||| || || Sbjct 5652152 AAAACCTGTTCCAATTTTGCAGATGGTCTGGTATTCCTCGTTTTCGGTATCGTAGCAAGC 5652093 Query 197097 GAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAAC 197156 | ||| || | |||||||| || |||||||| ||| || ||| |||| || || || Sbjct 5652092 CAATAAAAAGCCACCGTAGGTGCCAGTTCTCTTGCCCTTGCCTTTGTAGCCGCCAATCAC 5652033 Query 197157 CACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGCCAGCT 197216 || |||||||| | ||||| ||| |||||||| || || || || |||||| | Sbjct 5652032 GACGAGATCCAGGGAGTCGCCCACATTGGAGATGTAATCCTTTTTAAGCTTAAGCCAGTT 5651973 Query 197217 TCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCC 197276 ||||||||||| || |||||||||||||| | ||||| || || | ||| | || Sbjct 5651972 CCTAGATCTCTTTGCGATCTCGTAGGTTGCTTCCTGATCCAGTGTTTTAACCATAAGACC 5651913 Query 197277 CTCGCA 197282 ||| || Sbjct 5651912 CTCACA 5651907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676613295559120