Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq13747 260 3e-64 seq13746 174 3e-38 >seq13747 Length=19884421 Score = 260 bits (288), Expect = 3e-64 Identities = 563/827 (68%), Gaps = 19/827 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | || ||||||||||| |||||||| |||| |||||| |||| Sbjct 8706147 CTGGTACTCTCCCACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTC 8706206 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTC-AGGCCCATCTGTTCCAGCA 47957 |||||| ||| ||||| ||||| || | || | | ||||| || | |||| | Sbjct 8706207 CATGAAATTGAAAGGGTTTTTGGTGTTGTAGATTT-TGCCTACGCCCAGCTCTACCAGTA 8706265 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | ||||| || | |||||||||| ||||| | | | ||||||||| || | Sbjct 8706266 GCCGGTCCGCCACAAATTCGATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAAT 8706325 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||||||||| || | ||||| ||||||| ||| || | ||| || || | | ||||| Sbjct 8706326 TCACGGGCAAGGCGTCGGTGAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAATCT 8706385 Query 48078 GCTTAACGCGGGACTCT-GAGG--GTTTGTTGCGCAGGTGCTTGG-CATAGAGCATGCAG 48133 | | ||| ||| || | |||| | | ||||||| | |||| |||| ||| Sbjct 8706386 CGATGATGCG---CTCGCGACGTGGTTTCTGGACGAGGTGCTGGAACATA-AGCA--CAG 8706439 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 | ||||| | ||||| |||||||||| | ||| ||| ||||||||||| ||||| Sbjct 8706440 -CGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCG 8706498 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || || | |||||| || | || || ||| |||||| || Sbjct 8706499 GGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATA 8706558 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 |||||||| || || || ||| ||| | ||| || || || ||| || ||| Sbjct 8706559 CCCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTTGGCTGACTTCGAAGAAATC 8706618 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGA-TGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| || ||||| |||||||| ||| | ||| ||||||||||| ||||| ||| Sbjct 8706619 CAGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCA-GGCATCGTCTCAATGGCATTGAA 8706677 Query 48373 GAGCTTCTTGCACTCACCTGCG--TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 || | | ||| | || | || || || ||| || ||| ||||||| Sbjct 8706678 CAGGT--ATTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATC 8706735 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 ||||||||||| || || || ||||| ||||| |||||||| | ||||| ||| Sbjct 8706736 TCAGAGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACC 8706795 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || ||| | ||||| ||| ||||| || || || ||||| ||||||||| Sbjct 8706796 TGAACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCA 8706855 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCC 48610 |||||||| || || || | ||| ||||| |||| || | || || ||| | Sbjct 8706856 AAGAAGGCCAGCACGTGGGAGATGAAGTGGCGTTCGTCGTCCTTAAGGCGATGCCAATCG 8706915 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 | || || |||||||| || || ||||||||||| || || Sbjct 8706916 GTGAGATCCTTCGAGAGGTCCACCTCCTCGACAGTCCAGAAAGAGGC 8706962 >seq13746 Length=16180835 Score = 174 bits (192), Expect = 3e-38 Identities = 853/1324 (64%), Gaps = 70/1324 (5%) Strand=Plus/Plus Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGT--TTGAAG 212961 ||| |||| || | ||||| || || ||||| || | ||||||| || | ||| | Sbjct 14158579 TGATGGTTAACCACTTGGAACTCCCCGGAGAGTACGCG--TCTGGTATAAATATTTGTTG 14158636 Query 212962 TGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGG 213021 |||||||||||| | ||||||||| |||| |||||| ||||| ||||||||||| | Sbjct 14158637 TGTAGGGCTCGAAGGACTCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCG 14158696 Query 213022 GAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCC 213080 |||| |||| || ||| || ||||| |||| ||| || | || || | | Sbjct 14158697 GAGCAACCAATAGGGAGTTTCTGACTCCATGCTGTTTGAT-AGACTCCTTCAGAGATTTC 14158755 Query 213081 CAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG 213140 |||||||| |||| ||| ||| || | | ||||||||| |||||| || Sbjct 14158756 CAGTCCCA-----GAGACCAGTCGGCGT--TTTA--TCCCACATGTCGTACTGCAGAATT 14158806 Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 || || || || ||||| || | |||| || | || | | | |||||| ||| Sbjct 14158807 CCCTTACTTACTGGGCTTCCTTCATAAGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCG 14158866 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTT-GAGCTTCTT 213259 || |||| |||||| | ||||||| |||||||| |||| ||| || ||| Sbjct 14158867 CAACTGGCCTCCAGGGCTCCAAAGTAGATTGTTTCAAAAATCTGTTGGTTCAAGAGGCTT 14158926 Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAA----CACATCAGCCAGCCCCT 213315 ||||| | | |||| || | || | ||| | | |||||||| |||| Sbjct 14158927 -GCCTCCTCGCTTTCGTAGGG----ATAACGCATAAGAATCAGCGCGTCAGCCAGTCCCT 14158981 Query 213316 GGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGT 213375 | || ||||| ||||| || | || |||| || ||||| | |||| || || | Sbjct 14158982 GAACACCGATTCCGATAGGACGATGCCTCATATTGGACTTCTTGGCCTCCGGCAGCGGAT 14159041 Query 213376 AAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCAC---TTTGGTGACATGGG 213432 |||||||| || || ||||| |||||||| | ||||||| || ||||| | Sbjct 14159042 AAAAGTTGATATCTATTATCTTATTGAGGTTTC---TGGCCACCGTCTTTGTGACCTCCT 14159098 Query 213433 CCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGC 213492 || | | ||| | | || | | | | ||||||| || |||||| Sbjct 14159099 TTAGCT--TTTTGAAGTCATATGTCTTCTCGGGAGT-CACAAACATGTTGAGAGCGATGG 14159155 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552 ||||| |||||||| || | ||| | || | ||||| | || || ||||||| Sbjct 14159156 AGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAAGAATACTCAACAATTTCCGTGCACA 14159215 Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCT 213612 | |||||||| |||||||||| ||||| ||||| |||| |||| | |||| Sbjct 14159216 GATTGCTGCACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGTCCT 14159275 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672 || | |||||||| || || ||||| | || ||| | | || ||| | | Sbjct 14159276 TGAACAGCATGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAACCACAAGG 14159335 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGC-GTAGCCTCGTACTGTTCGTAGAGC 213731 || || || || || || | ||| | || ||||| | | ||||| Sbjct 14159336 ACTGTGCTTTCACAGTTCGATTGGCGCGTCCCTCCTGT----TCGTATTTCACATAGAGT 14159391 Query 213732 TCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACA-GGATGCGGGACACATGAG 213790 | | || || | |||||| || | || || || || ||| ||||||||| | Sbjct 14159392 TTTTCAAACTCATCGCCCCACACATCATGGAGGCCAGGGCATTTATG-GGGACACATTAA 14159450 Query 213791 GCTCCAGTCCCCGTCAT----CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846 ||||||| |||| ||| |||| | |||||| || || || | |||||| | Sbjct 14159451 CGACCAGTCC---TCATTGGCCTC-CACTCGTTTCATGAAGAGATCTGGTATCCACAGGG 14159506 Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906 | ||||| || | || | ||| ||| |||| || || || || |||| Sbjct 14159507 CATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTATTCTTCTTAAGGTCCAGAA 14159566 Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG- 213965 | ||||| | |||| ||||| ||||||| || ||||||||||| ||||||| |||| Sbjct 14159567 ACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGC 14159626 Query 213966 --CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023 || ||||| ||||| || ||||| |||| |||| | ||| | || ||||| | Sbjct 14159627 CACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGC 14159686 Query 214024 CGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCT---CA-GGTTGCT 214078 | ||||| ||| || || ||| |||| | || |||| | | |||| || | ||| Sbjct 14159687 CATTGGA-TGTGCCATTCGTT-CCGC-AAAT-CGAG--GTA--CCCTTTGCACGAATGC- 14159737 Query 214079 CATGGA----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAG 214134 ||||| || || || ||||| || ||||||||||||||||||| || || | Sbjct 14159738 AATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGGCGCATTGCTCAACCG 14159797 Query 214135 TCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCT 214194 | | ||| || | ||| ||| | || | | |||| | ||| ||| ||| |||| Sbjct 14159798 ATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAAACAGGACGACAGCT 14159857 Query 214195 GGGG 214198 |||| Sbjct 14159858 GGGG 14159861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931372704444160