Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13746 187 3e-42 >seq13746 Length=16180835 Score = 187 bits (206), Expect = 3e-42 Identities = 1107/1746 (63%), Gaps = 50/1746 (3%) Strand=Plus/Minus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 ||||| | ||||| || |||||||| || || || |||||||| ||| ||| | |||||| Sbjct 14159992 ACATGCTTATGCGCGTGGCAATCGGAATTCATGGAGAAGACATCGATGCTGCCGTGGAGA 14159933 Query 75279 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 75338 | ||| || | ||||| | || |||| |||||| | ||||| || || |||| Sbjct 14159932 CGTACAACTTGCTGTCCGAGCGTTATTTCACTCACGCTTCGCCAACACTTTTTGCCGCTG 14159873 Query 75339 GTACACCAA--GACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 75396 ||| || | || ||| |||| || ||||| | ||| | | ||||| || Sbjct 14159872 C--CACGAATCGTCCCCAGCTGTCGTCCTGTTTCCTCCTGACCATGACTGCCGACTCCAT 14159815 Query 75397 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 75456 | | ||||||| | | || | | || || ||||| |||| ||||| ||||| Sbjct 14159814 CGAGGGTATCTTCAAATCGGTTGAGCAATGCGCCATGATCTCCAAGTCTGCTGGTGGTAT 14159755 Query 75457 TGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTCGGGGGACAAATGGTC 75515 ||| | || ||||| | | || || | |||| ||| | || || ||||| Sbjct 14159754 TGGTCTTAACGTCCATTGCATTCGTGCAAAGGGTACCTCG-ATTTGCGGAACGAATGGCA 14159696 Query 75516 AATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATC 75575 ||| |||| | |||| ||||| | || |||||| | ||||| ||||| ||| Sbjct 14159695 CATCCAATGGCCTGGTTCCTATGCTGAGAGTCTTTAACAACGTGGCGCGGTATGTGGATC 14159636 Query 75576 AAGCGGGGCGTCGCAAGGGGTC------CATCGCGGTCTACTTGGAACCATGGCATGCCG 75629 | ||| || ||||| || | | | || | || |||| || |||||| | | Sbjct 14159635 A---GGGTGGTGGCAAGCGGCCGGGAGCCTTTGCCATTTATCTGGAGCCCTGGCATTCGG 14159579 Query 75630 ATATCATGGAGTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGA 75688 || | | ||||| || || ||| || | | || | |||||| ||| | Sbjct 14159578 ATGTATTTGAGTTTCTGGACCTTAAGAAGAATACT-GGCAAGGAAGAGCATCGAGCCCGC 14159520 Query 75689 GATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGT 75748 ||| | || | |||||||||| ||||| || |||||||| || || |||| || Sbjct 14159519 GATTTGTTCTATGCCCTGTGGATACCAGATCTCTTCATGAAACGAGTGGAGGCCAATGAG 14159460 Query 75749 CAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAG 75808 | ||||| | | ||||| | || || || ||| || | | ||| || ||| Sbjct 14159459 GACTGGTCGTTAATGTGTCCCCATAAATGCCCTGGCCTCCATGATGTGTGGGGCGATGAG 14159400 Query 75809 TTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCC 75868 |||||| ||||| || || ||| ||||||| | |||||| ||||| ||| Sbjct 14159399 TTTGAAAAACTCTATGTGAAATACGAACAGGAGGGACGCGCCAATCGAACTGTGAAAGCA 14159340 Query 75869 GCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCT 75927 | | || ||| ||||| | | || || ||||||||||| || || ||||| Sbjct 14159339 -CAGTCCTTGTGGTTTGCTATCATTGAGTCGCAAGTGGAGACTGGAAATCCTTACATGCT 14159281 Query 75928 TTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTC 75987 | |||||| || || ||| ||||| |||||| ||||| |||| || || ||| || Sbjct 14159280 GTTCAAGGACGCCTGCAACCGAAAGAGCAACCAACAGAATGTGGGCACCATTAAGTGCAG 14159221 Query 75988 AAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTT 76047 ||||| |||||||||||| | ||||| | || |||| || ||||||||||| Sbjct 14159220 CAATCTGTGCACGGAAATTGTTGAGTATTCTTCACCTGACGAGATTGCAGTTTGCAATTT 14159161 Query 76048 GGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAA 76107 ||| || ||||| || | || ||| | | |||| || | ||| | |||| Sbjct 14159160 GGCCTCCATCGCTCTCAACATGTTTGTGACTCCCGAGA---AGACATATGACTTCAAAAA 14159104 Query 76108 ACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTT 76167 || | || ||||||||| || ||| ||| || || | || || | || || Sbjct 14159103 GCTAAAGGAGGTCACAAAGACGGTGGCCAGAAACCTCAATAAGATAATAGATATCAACTT 14159044 Query 76168 TTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGT 76227 |||||| | | || ||||| |||||| | || | ||||| || | ||||| Sbjct 14159043 TTATCCGCTGCCGGAGGCCAAGAAGTCCAATATGAGGCATCGTCCTATCGGAATCGGTGT 14158984 Query 76228 TCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTGATTCAGATGAAGCCA 76286 ||| || || || || | | ||| || || || || | | || || || || | Sbjct 14158983 TCAGGGACTGGCTGACGCGCTGATTCTTATG-CGTTATCCCTACGAAAGCGAGGAGGCAA 14158925 Query 76287 AGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTG 76346 |||| | || |||||||| || || | | |||||||||| ||||| | Sbjct 14158924 GCCTCTTGAACCAACAGATTTTTGAAACAATCTACTTTGGAGCCCTGGAGGCCAGTTGCG 14158865 Query 76347 AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG--CGTCCCAAGG 76404 || |||| || | || | ||||| || | ||| || || | || |||| Sbjct 14158864 AACTGGCCCAAAAAGACGGAACTTATGAAACTTATGAAGGAAGCCCAGTAAGT---AAGG 14158808 Query 76405 G-GTGCTTCAGTTTGATATGTGGGAAGGTGAAA--CCAA--GCTCAACTACGACTGGGAT 76459 | | || |||| || |||||||| | ||| || | | || || |||||| | Sbjct 14158807 GAATTCTGCAGTACGACATGTGGGA---TAAAACGCCGACTGGTC-TCTGGGACTGGAAA 14158752 Query 76460 GTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 76519 ||| ||||| ||||| || | || | | ||| || ||| | || || ||| Sbjct 14158751 TCTCTGAAGGAGTCTATCAAACAGCATGGAGTCAGAAACTCCCTATTGGTTGCTCCGATG 14158692 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || ||||| || || || || || ||||||| || || | ||| || || ||||||||| Sbjct 14158691 CCCACAGCATCGACTGCTCAGATTATGGGTAACAACGAGTCCTTCGAGCCCTACACAACA 14158632 Query 76580 AACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTC 76639 || || || ||| | ||| | || ||||| | || ||| | || | | Sbjct 14158631 AATATTTATACCAGACGCGTACTCTCCGGGGAGTTCCAAGTGGTTAACCATCATTTGCTG 14158572 Query 76640 AATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT-GAAAGC 76698 | ||| | | | || | | | | ||| | | || |||||| ||| || | ||| Sbjct 14158571 AGGGACTTGACGGAGCTGGATTTGTGGGACGATGACATGAAGAATCAGATAATCTCCAGC 14158512 Query 76699 GGGTGGTTCCATTCAAAATATCTCA--GATATCCCAGATGATATCAAGAATCTCTACCGC 76756 || || || ||||||||||| | || |||| | | | || | | || ||| Sbjct 14158511 AGG-GGATCTATTCAAAATATTGAATCCATTCCCCAAAAGGT-TCGCG-ACCTTTACAAA 14158455 Query 76757 ACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTC 76816 ||||| ||||||||| ||||| |||| | |||||||| ||||| ||| || Sbjct 14158454 ACAGTATGGGAAATCTCAGTGAAATCAACCATTAAAATGGCCGCTGATCGCGGTGCGTTT 14158395 Query 76817 ATTGATCAAAGTCAAAGTATGAATCTATTCAT---GGAAAGTCCAACGATGTCCAAGCTC 76873 || ||||| || || | || ||| ||| | | || | ||| ||| |||||| Sbjct 14158394 ATAGATCAGAGCCAGTCCTTCAA--TATCCATGTGGCAGAGCCAAACTATG-GAAAGCTC 14158338 Query 76874 TCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGA 76933 | || || ||| | ||| | |||||| || || ||||||||||||||||| | || Sbjct 14158337 ACATCCATTCATTTCTACTCCTGGAAAGCTGGTCTTAAAACCGGAATGTACTACTTGCGC 14158278 Query 76934 TCAAAG 76939 ||||| Sbjct 14158277 ACAAAG 14158272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596467072057120