Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq13745 109 2e-18 seq13749 91.5 4e-13 seq13746 91.5 4e-13 >seq13745 Length=6960332 Score = 109 bits (120), Expect = 2e-18 Identities = 186/264 (70%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 ||||| ||| || | ||||||||| || ||||| ||| | || || || || ||| Sbjct 510473 TCCATGGCCTTTATCAGACGACGCTGGATGTAACCGGTTTCGGCGGTCTTCACGGCCGTA 510414 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || ||||| | ||||| ||||| || |||||| | | ||| || ||| ||||| Sbjct 510413 TCGATGAGACCCTCGCGACCGCCCATGGCGTGGAAGTAGAACTCCGAGGG-CGTCAGCCC 510355 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750 | | | | ||| |||| ||||| || |||| |||||| || ||||||| |||| | Sbjct 510354 GGCCAGATACGAGTTCTCCACGAAGCCGCGCGACTCGGGACCGTAATCGTC---CTTGAT 510298 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| |||||||| | || | || || || || ||||| || || |||||||| Sbjct 510297 GAAGTGGGGCAGGGTGCGCTTGCGGAACCCATACGGAATCCGCTTACCCTCGACGTTCTG 510238 Query 302811 CTGTCCCAGGCACGAAATCATCTG 302834 ||| |||| || | ||| | ||| Sbjct 510237 CTGGCCCACACAAGCAATAACCTG 510214 >seq13749 Length=23697760 Score = 91.5 bits (100), Expect = 4e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| |||||| ||||| |||||||||||||||||||| ||||| || |||||| Sbjct 20510769 GCACCGTGGGAAATCTGGCAATCGCGCTCCATTTCACCGAAACGTAGACCTCCGTCGCGA 20510828 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | |||||| |||||| || ||| | | ||||| || || || Sbjct 20510829 GCACGACCCTCCATAGGCTGGCGTACTAGAATCTGAACTGGACCACGGGCACGCGAGTGG 20510888 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 ||| || | ||||| ||||| |||||||||||| | | ||| || | ||| Sbjct 20510889 ATCTTGTCGTCCACCATGTGCTTAAGACGCTGGTAGTAAGTGGGGCCCAAGAA 20510941 >seq13746 Length=16180835 Score = 91.5 bits (100), Expect = 4e-13 Identities = 538/853 (63%), Gaps = 19/853 (2%) Strand=Plus/Plus Query 155415 CCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTCTTCTTGTTT 155474 |||||||| || || |||| || |||||||| |||| | | |||| | || | Sbjct 14158978 CCCTGAACACCGATTCCGATAGGACGATGCCTCATATTGGACTT-CTTGGCCTCCGGCAG 14159036 Query 155475 GGG-TAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTTGGTTACGTC 155533 || ||||| || | ||| || || ||||| | ||| | ||| ||| || || || Sbjct 14159037 CGGATAAAAGTTGATATCTATTATCTTATTGAGGTTTCTGGCCACCGTCTTTGTGACCTC 14159096 Query 155534 TGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATAGA 155593 || || ||||| |||| || || | | |||||||| ||| | || || Sbjct 14159097 CTTTAGCTTTTTGAAGTCATATGTCTTCTCGGGAGTCACAAACATGTTGAGAGCGATGGA 14159156 Query 155594 CGCCAGATTACATACCGCAGTCTCCTTGTC-GTCGCTGTATTCT--ACAATCTCACAGCA 155650 |||| ||| || || ||| |||| ||| | | | || || ||||| || ||| Sbjct 14159157 GGCCAAATTGCAAACTGCAATCTC---GTCAGGTGAAGAATACTCAACAATTTCCGTGCA 14159213 Query 155651 CAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATC 155710 ||| || | ||| |||||||| | ||||| ||||| || | ||| || || || Sbjct 14159214 CAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGTC 14159273 Query 155711 CTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAG 155770 |||| | || ||||| || |||| ||||||| || | || | || | ||| | Sbjct 14159274 CTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAACCACAA 14159333 Query 155771 GTCACGGGCATTAA---TTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAG 155827 | | || || | || | ||| | || | ||| || ||||||| ||| || Sbjct 14159334 GGACTGTGCTTTCACAGTTCGATTGGCGCGTC---CCTCCTGTTCGTATTTCACATAGAG 14159390 Query 155828 CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAG 155887 || | || || || | |||| || |||||||| |||| ||| || | | Sbjct 14159391 TTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAGGGCATTTATGGGGACACATTAA 14159450 Query 155888 CGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATA 155947 |||||| | ||| | || || | ||| || | ||| ||| | ||||| Sbjct 14159451 CGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAGGGCATA 14159510 Query 155948 GAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATT 156006 ||| | || | || | || ||| || | ||| ||||||| || || | || | Sbjct 14159511 GAACAAATCGCGGGCTCGATG-CTCTTCCTTGCCAGTATTCTTCTTAAGGTCCAGAAACT 14159569 Query 156007 CCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTGCCAC 156066 | | ||| | ||| ||||||||||| || ||||| || || |||||||| Sbjct 14159570 CAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGCCAC 14159629 Query 156067 ---CCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCAT 156123 ||||||| |||||||| || || || ||||| | |||||||||| | |||| Sbjct 14159630 CACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGCCAT 14159689 Query 156124 TGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTA 156183 |||| |||||||| ||||||| ||| | ||| || |||| ||| | | | Sbjct 14159690 TGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTTTGCACGAATGCAATGGACGTTAA 14159749 Query 156184 GTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATAC 156243 | ||||||||||| | | || || || ||||||| || || | ||||| |||| Sbjct 14159750 GACCAATACCACCAGCAGACTTGGAGATCATGGCGCATTGCTCAACCGATTTGAAGATAC 14159809 Query 156244 CTTCAATAGAATC 156256 | || || || || Sbjct 14159810 CCTCGATGGAGTC 14159822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471558325991413