Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq13745 109 2e-18
seq13749 91.5 4e-13
seq13746 91.5 4e-13
>seq13745
Length=6960332
Score = 109 bits (120), Expect = 2e-18
Identities = 186/264 (70%), Gaps = 8/264 (3%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
||||| ||| || | ||||||||| || ||||| ||| | || || || || |||
Sbjct 510473 TCCATGGCCTTTATCAGACGACGCTGGATGTAACCGGTTTCGGCGGTCTTCACGGCCGTA 510414
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693
|| || ||||| | ||||| ||||| || |||||| | | ||| || ||| |||||
Sbjct 510413 TCGATGAGACCCTCGCGACCGCCCATGGCGTGGAAGTAGAACTCCGAGGG-CGTCAGCCC 510355
Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750
| | | | ||| |||| ||||| || |||| |||||| || ||||||| |||| |
Sbjct 510354 GGCCAGATACGAGTTCTCCACGAAGCCGCGCGACTCGGGACCGTAATCGTC---CTTGAT 510298
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
||||| |||||||| | || | || || || || ||||| || || ||||||||
Sbjct 510297 GAAGTGGGGCAGGGTGCGCTTGCGGAACCCATACGGAATCCGCTTACCCTCGACGTTCTG 510238
Query 302811 CTGTCCCAGGCACGAAATCATCTG 302834
||| |||| || | ||| | |||
Sbjct 510237 CTGGCCCACACAAGCAATAACCTG 510214
>seq13749
Length=23697760
Score = 91.5 bits (100), Expect = 4e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| |||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct 20510769 GCACCGTGGGAAATCTGGCAATCGCGCTCCATTTCACCGAAACGTAGACCTCCGTCGCGA 20510828
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
|| | |||||| |||||| || ||| | | ||||| || || ||
Sbjct 20510829 GCACGACCCTCCATAGGCTGGCGTACTAGAATCTGAACTGGACCACGGGCACGCGAGTGG 20510888
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
||| || | ||||| ||||| |||||||||||| | | ||| || | |||
Sbjct 20510889 ATCTTGTCGTCCACCATGTGCTTAAGACGCTGGTAGTAAGTGGGGCCCAAGAA 20510941
>seq13746
Length=16180835
Score = 91.5 bits (100), Expect = 4e-13
Identities = 538/853 (63%), Gaps = 19/853 (2%)
Strand=Plus/Plus
Query 155415 CCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTCTTCTTGTTT 155474
|||||||| || || |||| || |||||||| |||| | | |||| | || |
Sbjct 14158978 CCCTGAACACCGATTCCGATAGGACGATGCCTCATATTGGACTT-CTTGGCCTCCGGCAG 14159036
Query 155475 GGG-TAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTTGGTTACGTC 155533
|| ||||| || | ||| || || ||||| | ||| | ||| ||| || || ||
Sbjct 14159037 CGGATAAAAGTTGATATCTATTATCTTATTGAGGTTTCTGGCCACCGTCTTTGTGACCTC 14159096
Query 155534 TGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATAGA 155593
|| || ||||| |||| || || | | |||||||| ||| | || ||
Sbjct 14159097 CTTTAGCTTTTTGAAGTCATATGTCTTCTCGGGAGTCACAAACATGTTGAGAGCGATGGA 14159156
Query 155594 CGCCAGATTACATACCGCAGTCTCCTTGTC-GTCGCTGTATTCT--ACAATCTCACAGCA 155650
|||| ||| || || ||| |||| ||| | | | || || ||||| || |||
Sbjct 14159157 GGCCAAATTGCAAACTGCAATCTC---GTCAGGTGAAGAATACTCAACAATTTCCGTGCA 14159213
Query 155651 CAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATC 155710
||| || | ||| |||||||| | ||||| ||||| || | ||| || || ||
Sbjct 14159214 CAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGTC 14159273
Query 155711 CTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAG 155770
|||| | || ||||| || |||| ||||||| || | || | || | ||| |
Sbjct 14159274 CTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAACCACAA 14159333
Query 155771 GTCACGGGCATTAA---TTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAG 155827
| | || || | || | ||| | || | ||| || ||||||| ||| ||
Sbjct 14159334 GGACTGTGCTTTCACAGTTCGATTGGCGCGTC---CCTCCTGTTCGTATTTCACATAGAG 14159390
Query 155828 CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAG 155887
|| | || || || | |||| || |||||||| |||| ||| || | |
Sbjct 14159391 TTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAGGGCATTTATGGGGACACATTAA 14159450
Query 155888 CGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATA 155947
|||||| | ||| | || || | ||| || | ||| ||| | |||||
Sbjct 14159451 CGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAGGGCATA 14159510
Query 155948 GAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATT 156006
||| | || | || | || ||| || | ||| ||||||| || || | || |
Sbjct 14159511 GAACAAATCGCGGGCTCGATG-CTCTTCCTTGCCAGTATTCTTCTTAAGGTCCAGAAACT 14159569
Query 156007 CCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTGCCAC 156066
| | ||| | ||| ||||||||||| || ||||| || || ||||||||
Sbjct 14159570 CAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGCCAC 14159629
Query 156067 ---CCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCAT 156123
||||||| |||||||| || || || ||||| | |||||||||| | ||||
Sbjct 14159630 CACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGCCAT 14159689
Query 156124 TGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTA 156183
|||| |||||||| ||||||| ||| | ||| || |||| ||| | | |
Sbjct 14159690 TGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTTTGCACGAATGCAATGGACGTTAA 14159749
Query 156184 GTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATAC 156243
| ||||||||||| | | || || || ||||||| || || | ||||| ||||
Sbjct 14159750 GACCAATACCACCAGCAGACTTGGAGATCATGGCGCATTGCTCAACCGATTTGAAGATAC 14159809
Query 156244 CTTCAATAGAATC 156256
| || || || ||
Sbjct 14159810 CCTCGATGGAGTC 14159822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471558325991413
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |