Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq13744 168 8e-36
seq13748 154 2e-31
seq13745 145 9e-29
seq13747 93.3 5e-13
>seq13744
Length=5790199
Score = 168 bits (186), Expect = 8e-36
Identities = 152/191 (80%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
|||||||||||||||||||| |||||||| || || | | || || ||| ||
Sbjct 577264 AGAAGCGCACCGACGACATCATCTCGTGGGACGCCGACTTCCTCAAGGTGGACCAGGGCA 577323
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
| ||||| || ||||||| || |||||||| || ||||||||| ||||| || ||
Sbjct 577324 CACTCTTCGAACTGATCCTGGCGGCCAACTATCTGGACATCAAGGGCCTGCTGGAGCTCA 577383
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
|||||| |||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct 577384 CCTGCAAGACTGTGGCCAACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACCT 577443
Query 1592286 TTAACATCAAG 1592296
| |||||||||
Sbjct 577444 TCAACATCAAG 577454
>seq13748
Length=23293914
Score = 154 bits (170), Expect = 2e-31
Identities = 374/557 (67%), Gaps = 12/557 (2%)
Strand=Plus/Minus
Query 1852106 GGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAG 1852165
||||| | | ||||| ||||||| |||||| || ||||||| | || |||
Sbjct 8902343 GGGTTCATGAAGTGGATGCGCTTCTCATAGCCCAGTTGGGGCAGGTACTTCTCCGAGAAG 8902284
Query 1852166 GCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 1852225
| || || || ||||| || || |||||||| || || || | |||| || ||||
Sbjct 8902283 GTGAAGATTTTACGCTGATCCACGCCACCAAACTGAGCATCCACCTTCAGGTACTCCTCG 8902224
Query 1852226 TCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCTTG 1852285
|| |||||||||| ||||| |||| | || | |||| || ||||
Sbjct 8902223 TCCAGGGCCTGCAGCCCAGGGTACAGCAACCCGGAGAGTAAGGGGTACTCCACCTGCTTG 8902164
Query 1852286 ACCACCTGAGCGGCGGCCTT--TTGCGCCGTGCCGGTGCGCACGTGCGCCGCGAGTCGGT 1852343
||||||| || ||||||| ||||| ||||| || | || | || ||| ||
Sbjct 8902163 ACCACCTCCGCTCCGGCCTTCTTTGCGTCGTGCTGGGTCACAACCGAGCTT--AGTTTGT 8902106
Query 1852344 AGAGGTCGAGCGCGTAGGCGCCGCCGCA--CTGGTACTCGGTGCCGCGCACAAACT-CGA 1852400
| | ||||| | ||| | || | | |||||| ||| |||| |||||||| | |
Sbjct 8902105 ATACATCGAGGGTGTA--CTCCTTGGAAAGCTGGTAGTCGCTGCCCTTCACAAACTTCAA 8902048
Query 1852401 GTCCGCCCAGCGGCACGCCGATGT-GCTGGAGCATGGCCTTGATGGCAAACTCGTACCAG 1852459
| | | || || || || ||| ||| | |||||||||||| | |||||| |
Sbjct 8902047 CTTCTCG-AGTGGAACTCCAATGGAGCTCAA-CATGGCCTTGATAACCTGCTCGTAGTAC 8901990
Query 1852460 CGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACG 1852519
|| || | || | ||| |||||||| ||| |||||| |||| |||||| | |
Sbjct 8901989 TGGGTCCTCAGCTCCAAGAGGGACCACGGCGCCTTCATGTTGTCCAGGTAGGCGTGTAGG 8901930
Query 1852520 TCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATG 1852579
|||||||| ||||| ||||| |||||||||| ||||| ||||| | || | |||
Sbjct 8901929 TCGGCAAACAGGATGGTGACCTCGCAGCCGGCCTTCAGAAAATCGGCAATCTTCGACATG 8901870
Query 1852580 GGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAGG 1852639
||||| |||||| | | || || || ||||||| |||||| ||||| || || ||||
Sbjct 8901869 GGCACGAAGTAGGCGACATGTGGTTTTCCCGTCGTCGCCGTTCCCCAGTAGATCTTCAGA 8901810
Query 1852640 GGGCGCTCGGCCATGAT 1852656
||||| |||| |||
Sbjct 8901809 TCCCGCTCTGCCAGGAT 8901793
Score = 100 bits (110), Expect = 3e-15
Identities = 202/296 (68%), Gaps = 4/296 (1%)
Strand=Plus/Minus
Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954
||| || || ||| |||||||||||| | ||| ||||||||| || | ||||||||
Sbjct 14556128 GGGACCTCCTGGCGTGGGCAAGACCACAACCATTCAGTGTCTGGCCCGGATACTCTTGGG 14556069
Query 1573955 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014
| | | | || || || ||||| || ||||| || | || || || |||| ||
Sbjct 14556068 AGACAGCTACAAGGAAGCTGTCCTCGAGCTAAACGCATCCAATGAACGAGGAATCGATGT 14556009
Query 1574015 CGTGCGCAAGATCATCAAGCACCACG-CCTCCAAGAGGATCGAC-CTGCCGCCCGGACGC 1574072
|| ||||| | |||||| | || ||| ||| ||| |||||| || ||
Sbjct 14556008 GGTCCGCAACAAGATCAAGATGTTTGCCCAGCAAAAGG--TGACATTGCCGCGTGGCCGG 14555951
Query 1574073 CACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTG 1574132
|||||| | | ||||| |||||||| ||| || | ||| || |||||||| || |
Sbjct 14555950 CACAAGATTGTTATCCTTGACGAGGCGGACAGCATGACGGAGGGCGCCCAGCAAGCGTTA 14555891
Query 1574133 CGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACAC 1574188
|| ||||||||| | ||| |||||| ||| | || || |||| || |||||
Sbjct 14555890 CGTCGCACCATGGAGATCTACAGCAACACCACGAGATTCGCTTTGGCCTGTAACAC 14555835
>seq13745
Length=6960332
Score = 145 bits (160), Expect = 9e-29
Identities = 212/297 (71%), Gaps = 12/297 (4%)
Strand=Plus/Plus
Query 507598 GGTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATG---AACCGGCAGCCGTCGCT 507654
||| ||||| || ||||||| ||||| | |||| || |||||||||||| ||||
Sbjct 509135 GGTGGAGCGGCATCTGCGCGA---CGACGACCTGGTCATCTTCAACCGGCAGCCGACGCT 509191
Query 507655 GCACATGGGCTCCATGCTCATGCACAAGGTG---GTGCCCATGCCCGGGCGCACCATGCG 507711
||||| | ||| | ||||| |||| |||| ||||| || |||| | ||
Sbjct 509192 GCACAAGATGAGTATGATGGGGCACAGGGTGAAGGTGC---TGCCCTGGTCCACCTTCCG 509248
Query 507712 ATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCT 507771
| |||||| | ||| ||||||||||||| || ||||||||||||||||||||
Sbjct 509249 CATGAACCTGTCGTGCACATCGCCCTACAACGCCGATTTCGACGGCGACGAGATGAACCT 509308
Query 507772 GCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCATGAGCGTGTCGCT 507831
||||||||||||||| | | |||||||||||||| | ||| | | | | | |
Sbjct 509309 GCACGTGCCCCAGTCGATGGAGACGCGCGCCGAGGTGGAGAACATCCACATCACGCCCCG 509368
Query 507832 CAAGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGACGCCCT 507888
||| | | |||||||||||||||||||| |||| ||| | || |||| ||||
Sbjct 509369 GCAGATCATCACGCCGCAGGCCAACAAGCCCGTCATGGGCATTGTGCAGGACACCCT 509425
Score = 102 bits (112), Expect = 1e-15
Identities = 184/269 (68%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 507011 CTCCAGGTCGAGGTGGCCACCTACCACAACAACGACATTCGCGGCCAGAAGCAGTCGACC 507070
|| ||| || | ||||||||| |||||||||| | |||| | || | | |
Sbjct 508728 CTGCAGTTCCACGTGGCCACCCTGGTGGACAACGACATGCCCGGCATGCCGCGGGCCATG 508787
Query 507071 CAGCGCTCGGGCAAGCCCACCAAGGGCCTCGTGGAGCGGTTCAAGGGCAAGGAGGGTAGG 507130
||| || |||||||| |||| | || || ||||| |||||||||||||| |
Sbjct 508788 CAGAAGTCCGGCAAGCCGCTGAAGGCCATCAAGGCCCGGTTGAAGGGCAAGGAGGGCCGC 508847
Query 507131 ATCCGCGGCAATTGCATGGGCAAGCGCGTCAACTTTACCGCGCGCGCCGTCATCAGCCCC 507190
||||| ||||| | ||||||||||| || |||| |||| || | ||||| | ||
Sbjct 508848 ATCCGTGGCAACTTGATGGGCAAGCGTGTGGACTTCTCCGCCCGTACTGTCATTACTCCG 508907
Query 507191 GACCCCGAGATCGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACC 507250
|| ||| | | ||| ||| ||||||| ||||| |||| | ||| || |||
Sbjct 508908 GATCCCAATCTGCGCATCGACCAGGTGGGTGTGCCGCGCTCCATCGCCCAGAATCTGACC 508967
Query 507251 TTTCCCGAGCGCGTGACGCCCCTTACCAT 507279
|| ||||||| ||||||||| | | |||
Sbjct 508968 TTCCCCGAGCTGGTGACGCCCTTCAACAT 508996
>seq13747
Length=19884421
Score = 93.3 bits (102), Expect = 5e-13
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
||||||| ||||||||||| || ||||||| || || | ||||| || |
Sbjct 2598635 AGAAGCGAACCGACGACATTTCATCGTGGGATGCCGATTTCCTAAAAGTCGATCAAGGTA 2598694
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
| || |||||| | || || || ||||| ||| | |||| || ||| | || |
Sbjct 2598695 CTCTGTTTGAGCTCATTCTGGCGGCCAATTACTTGAACATTCAGGGCCTGTTGGACGTCA 2598754
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
|||||| |||||||||| ||||||||||||||||| || ||||||| ||| | || |
Sbjct 2598755 CCTGCAAGACTGTGGCCAATATGATCAAGGGCAAGTCCCCGCAGGAGATTCGCGACACGT 2598814
Query 1592286 TTAACATCA 1592294
| | |||||
Sbjct 2598815 TCACCATCA 2598823
Score = 93.3 bits (102), Expect = 5e-13
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
||||||| || || ||||| || ||||||| || || | || || ||| ||
Sbjct 17239082 AGAAGCGTACTGATGACATTTCATCGTGGGATGCTGATTTCCTAAAAGTTGATCAGGGCA 17239023
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
| || || ||| | ||| | || ||||| ||| | ||||| || ||| | ||| |
Sbjct 17239022 CTCTGTTCGAGCTCATCTTAGCGGCCAATTACTTGAACATCCAGGGCCTGTTGGATGTCA 17238963
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
|| ||| |||||||||| |||||||||||||||||||| ||||||| ||| | || |
Sbjct 17238962 CCTGTAAGACTGTGGCCAATATGATCAAGGGCAAGTCGCCGCAGGAGATTCGCGACACGT 17238903
Query 1592286 TTAACATCA 1592294
| | |||||
Sbjct 17238902 TCACCATCA 17238894
Score = 86.0 bits (94), Expect = 8e-11
Identities = 163/239 (68%), Gaps = 6/239 (3%)
Strand=Plus/Plus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
|||||| ||||| | || || ||||||||||| || || |||||||||| ||||||
Sbjct 8706150 GTACTCTCCCACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTCCAT 8706209
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCG---AGCGACGCGAGCAG 868815
| ||| ||||| || |||||| ||| || | || ||| | || ||
Sbjct 8706210 GAAATTGAAAGGGTTTTTGGTGTTGTAGA---TTTTGCCTACGCCCAGCTCTACCAGTAG 8706266
Query 868816 GCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGC 868875
||||| || ||||| |||||||| || |||| | | || |||||||||||| |
Sbjct 8706267 CCGGTCCGCCACAAATTCGATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAATT 8706326
Query 868876 CACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCT 868934
||| |||| | ||| | | ||||| | ||| || || || || ||| ||| ||||
Sbjct 8706327 CACGGGCAAGGCGTCGGTGAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAATCT 8706385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106010892673433
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