Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq13744 168 8e-36 seq13748 154 2e-31 seq13745 145 9e-29 seq13747 93.3 5e-13 >seq13744 Length=5790199 Score = 168 bits (186), Expect = 8e-36 Identities = 152/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 |||||||||||||||||||| |||||||| || || | | || || ||| || Sbjct 577264 AGAAGCGCACCGACGACATCATCTCGTGGGACGCCGACTTCCTCAAGGTGGACCAGGGCA 577323 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | ||||| || ||||||| || |||||||| || ||||||||| ||||| || || Sbjct 577324 CACTCTTCGAACTGATCCTGGCGGCCAACTATCTGGACATCAAGGGCCTGCTGGAGCTCA 577383 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 |||||| |||||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct 577384 CCTGCAAGACTGTGGCCAACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACCT 577443 Query 1592286 TTAACATCAAG 1592296 | ||||||||| Sbjct 577444 TCAACATCAAG 577454 >seq13748 Length=23293914 Score = 154 bits (170), Expect = 2e-31 Identities = 374/557 (67%), Gaps = 12/557 (2%) Strand=Plus/Minus Query 1852106 GGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAG 1852165 ||||| | | ||||| ||||||| |||||| || ||||||| | || ||| Sbjct 8902343 GGGTTCATGAAGTGGATGCGCTTCTCATAGCCCAGTTGGGGCAGGTACTTCTCCGAGAAG 8902284 Query 1852166 GCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 1852225 | || || || ||||| || || |||||||| || || || | |||| || |||| Sbjct 8902283 GTGAAGATTTTACGCTGATCCACGCCACCAAACTGAGCATCCACCTTCAGGTACTCCTCG 8902224 Query 1852226 TCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCTTG 1852285 || |||||||||| ||||| |||| | || | |||| || |||| Sbjct 8902223 TCCAGGGCCTGCAGCCCAGGGTACAGCAACCCGGAGAGTAAGGGGTACTCCACCTGCTTG 8902164 Query 1852286 ACCACCTGAGCGGCGGCCTT--TTGCGCCGTGCCGGTGCGCACGTGCGCCGCGAGTCGGT 1852343 ||||||| || ||||||| ||||| ||||| || | || | || ||| || Sbjct 8902163 ACCACCTCCGCTCCGGCCTTCTTTGCGTCGTGCTGGGTCACAACCGAGCTT--AGTTTGT 8902106 Query 1852344 AGAGGTCGAGCGCGTAGGCGCCGCCGCA--CTGGTACTCGGTGCCGCGCACAAACT-CGA 1852400 | | ||||| | ||| | || | | |||||| ||| |||| |||||||| | | Sbjct 8902105 ATACATCGAGGGTGTA--CTCCTTGGAAAGCTGGTAGTCGCTGCCCTTCACAAACTTCAA 8902048 Query 1852401 GTCCGCCCAGCGGCACGCCGATGT-GCTGGAGCATGGCCTTGATGGCAAACTCGTACCAG 1852459 | | | || || || || ||| ||| | |||||||||||| | |||||| | Sbjct 8902047 CTTCTCG-AGTGGAACTCCAATGGAGCTCAA-CATGGCCTTGATAACCTGCTCGTAGTAC 8901990 Query 1852460 CGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACG 1852519 || || | || | ||| |||||||| ||| |||||| |||| |||||| | | Sbjct 8901989 TGGGTCCTCAGCTCCAAGAGGGACCACGGCGCCTTCATGTTGTCCAGGTAGGCGTGTAGG 8901930 Query 1852520 TCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATG 1852579 |||||||| ||||| ||||| |||||||||| ||||| ||||| | || | ||| Sbjct 8901929 TCGGCAAACAGGATGGTGACCTCGCAGCCGGCCTTCAGAAAATCGGCAATCTTCGACATG 8901870 Query 1852580 GGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAGG 1852639 ||||| |||||| | | || || || ||||||| |||||| ||||| || || |||| Sbjct 8901869 GGCACGAAGTAGGCGACATGTGGTTTTCCCGTCGTCGCCGTTCCCCAGTAGATCTTCAGA 8901810 Query 1852640 GGGCGCTCGGCCATGAT 1852656 ||||| |||| ||| Sbjct 8901809 TCCCGCTCTGCCAGGAT 8901793 Score = 100 bits (110), Expect = 3e-15 Identities = 202/296 (68%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954 ||| || || ||| |||||||||||| | ||| ||||||||| || | |||||||| Sbjct 14556128 GGGACCTCCTGGCGTGGGCAAGACCACAACCATTCAGTGTCTGGCCCGGATACTCTTGGG 14556069 Query 1573955 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014 | | | | || || || ||||| || ||||| || | || || || |||| || Sbjct 14556068 AGACAGCTACAAGGAAGCTGTCCTCGAGCTAAACGCATCCAATGAACGAGGAATCGATGT 14556009 Query 1574015 CGTGCGCAAGATCATCAAGCACCACG-CCTCCAAGAGGATCGAC-CTGCCGCCCGGACGC 1574072 || ||||| | |||||| | || ||| ||| ||| |||||| || || Sbjct 14556008 GGTCCGCAACAAGATCAAGATGTTTGCCCAGCAAAAGG--TGACATTGCCGCGTGGCCGG 14555951 Query 1574073 CACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTG 1574132 |||||| | | ||||| |||||||| ||| || | ||| || |||||||| || | Sbjct 14555950 CACAAGATTGTTATCCTTGACGAGGCGGACAGCATGACGGAGGGCGCCCAGCAAGCGTTA 14555891 Query 1574133 CGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACAC 1574188 || ||||||||| | ||| |||||| ||| | || || |||| || ||||| Sbjct 14555890 CGTCGCACCATGGAGATCTACAGCAACACCACGAGATTCGCTTTGGCCTGTAACAC 14555835 >seq13745 Length=6960332 Score = 145 bits (160), Expect = 9e-29 Identities = 212/297 (71%), Gaps = 12/297 (4%) Strand=Plus/Plus Query 507598 GGTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATG---AACCGGCAGCCGTCGCT 507654 ||| ||||| || ||||||| ||||| | |||| || |||||||||||| |||| Sbjct 509135 GGTGGAGCGGCATCTGCGCGA---CGACGACCTGGTCATCTTCAACCGGCAGCCGACGCT 509191 Query 507655 GCACATGGGCTCCATGCTCATGCACAAGGTG---GTGCCCATGCCCGGGCGCACCATGCG 507711 ||||| | ||| | ||||| |||| |||| ||||| || |||| | || Sbjct 509192 GCACAAGATGAGTATGATGGGGCACAGGGTGAAGGTGC---TGCCCTGGTCCACCTTCCG 509248 Query 507712 ATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCT 507771 | |||||| | ||| ||||||||||||| || |||||||||||||||||||| Sbjct 509249 CATGAACCTGTCGTGCACATCGCCCTACAACGCCGATTTCGACGGCGACGAGATGAACCT 509308 Query 507772 GCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCATGAGCGTGTCGCT 507831 ||||||||||||||| | | |||||||||||||| | ||| | | | | | | Sbjct 509309 GCACGTGCCCCAGTCGATGGAGACGCGCGCCGAGGTGGAGAACATCCACATCACGCCCCG 509368 Query 507832 CAAGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGACGCCCT 507888 ||| | | |||||||||||||||||||| |||| ||| | || |||| |||| Sbjct 509369 GCAGATCATCACGCCGCAGGCCAACAAGCCCGTCATGGGCATTGTGCAGGACACCCT 509425 Score = 102 bits (112), Expect = 1e-15 Identities = 184/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 507011 CTCCAGGTCGAGGTGGCCACCTACCACAACAACGACATTCGCGGCCAGAAGCAGTCGACC 507070 || ||| || | ||||||||| |||||||||| | |||| | || | | | Sbjct 508728 CTGCAGTTCCACGTGGCCACCCTGGTGGACAACGACATGCCCGGCATGCCGCGGGCCATG 508787 Query 507071 CAGCGCTCGGGCAAGCCCACCAAGGGCCTCGTGGAGCGGTTCAAGGGCAAGGAGGGTAGG 507130 ||| || |||||||| |||| | || || ||||| |||||||||||||| | Sbjct 508788 CAGAAGTCCGGCAAGCCGCTGAAGGCCATCAAGGCCCGGTTGAAGGGCAAGGAGGGCCGC 508847 Query 507131 ATCCGCGGCAATTGCATGGGCAAGCGCGTCAACTTTACCGCGCGCGCCGTCATCAGCCCC 507190 ||||| ||||| | ||||||||||| || |||| |||| || | ||||| | || Sbjct 508848 ATCCGTGGCAACTTGATGGGCAAGCGTGTGGACTTCTCCGCCCGTACTGTCATTACTCCG 508907 Query 507191 GACCCCGAGATCGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACC 507250 || ||| | | ||| ||| ||||||| ||||| |||| | ||| || ||| Sbjct 508908 GATCCCAATCTGCGCATCGACCAGGTGGGTGTGCCGCGCTCCATCGCCCAGAATCTGACC 508967 Query 507251 TTTCCCGAGCGCGTGACGCCCCTTACCAT 507279 || ||||||| ||||||||| | | ||| Sbjct 508968 TTCCCCGAGCTGGTGACGCCCTTCAACAT 508996 >seq13747 Length=19884421 Score = 93.3 bits (102), Expect = 5e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 ||||||| ||||||||||| || ||||||| || || | ||||| || | Sbjct 2598635 AGAAGCGAACCGACGACATTTCATCGTGGGATGCCGATTTCCTAAAAGTCGATCAAGGTA 2598694 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | || |||||| | || || || ||||| ||| | |||| || ||| | || | Sbjct 2598695 CTCTGTTTGAGCTCATTCTGGCGGCCAATTACTTGAACATTCAGGGCCTGTTGGACGTCA 2598754 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 |||||| |||||||||| ||||||||||||||||| || ||||||| ||| | || | Sbjct 2598755 CCTGCAAGACTGTGGCCAATATGATCAAGGGCAAGTCCCCGCAGGAGATTCGCGACACGT 2598814 Query 1592286 TTAACATCA 1592294 | | ||||| Sbjct 2598815 TCACCATCA 2598823 Score = 93.3 bits (102), Expect = 5e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 ||||||| || || ||||| || ||||||| || || | || || ||| || Sbjct 17239082 AGAAGCGTACTGATGACATTTCATCGTGGGATGCTGATTTCCTAAAAGTTGATCAGGGCA 17239023 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | || || ||| | ||| | || ||||| ||| | ||||| || ||| | ||| | Sbjct 17239022 CTCTGTTCGAGCTCATCTTAGCGGCCAATTACTTGAACATCCAGGGCCTGTTGGATGTCA 17238963 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 || ||| |||||||||| |||||||||||||||||||| ||||||| ||| | || | Sbjct 17238962 CCTGTAAGACTGTGGCCAATATGATCAAGGGCAAGTCGCCGCAGGAGATTCGCGACACGT 17238903 Query 1592286 TTAACATCA 1592294 | | ||||| Sbjct 17238902 TCACCATCA 17238894 Score = 86.0 bits (94), Expect = 8e-11 Identities = 163/239 (68%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 |||||| ||||| | || || ||||||||||| || || |||||||||| |||||| Sbjct 8706150 GTACTCTCCCACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTCCAT 8706209 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCG---AGCGACGCGAGCAG 868815 | ||| ||||| || |||||| ||| || | || ||| | || || Sbjct 8706210 GAAATTGAAAGGGTTTTTGGTGTTGTAGA---TTTTGCCTACGCCCAGCTCTACCAGTAG 8706266 Query 868816 GCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGC 868875 ||||| || ||||| |||||||| || |||| | | || |||||||||||| | Sbjct 8706267 CCGGTCCGCCACAAATTCGATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAATT 8706326 Query 868876 CACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCT 868934 ||| |||| | ||| | | ||||| | ||| || || || || ||| ||| |||| Sbjct 8706327 CACGGGCAAGGCGTCGGTGAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAATCT 8706385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106010892673433