Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq13748 152 8e-31 seq13744 149 1e-29 seq13745 140 5e-27 >seq13748 Length=23293914 Score = 152 bits (168), Expect = 8e-31 Identities = 369/554 (67%), Gaps = 6/554 (1%) Strand=Plus/Minus Query 2411449 GGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAG 2411508 ||||| | | |||||||||||| |||||||| ||||||| | || ||| Sbjct 8902343 GGGTTCATGAAGTGGATGCGCTTCTCATAGCCCAGTTGGGGCAGGTACTTCTCCGAGAAG 8902284 Query 2411509 GCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 2411568 | ||||| || ||||| || || |||||||| || || || | |||| || |||| Sbjct 8902283 GTGAAGATTTTACGCTGATCCACGCCACCAAACTGAGCATCCACCTTCAGGTACTCCTCG 8902224 Query 2411569 TCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCATCTTG 2411628 || |||||||||| ||||| | | | ||| |||| || |||| Sbjct 8902223 TCCAGGGCCTGCAGCCCAGGGTACAGCAACCCGGAGAGTAAGGGGTACTCCACCTGCTTG 8902164 Query 2411629 ACCACCTGGGCGGCGGCCTT--TTGCGCCGTGCCGACGGTCACGCGCGCCGTCAGGCGCA 2411686 ||||||| || ||||||| ||||| ||||| | |||||| || | || Sbjct 8902163 ACCACCTCCGCTCCGGCCTTCTTTGCGTCGTGCTG--GGTCACAACCGAGCTTAGTTTGT 8902106 Query 2411687 AGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCGAGAC 2411746 | | ||||| ||||| | | | ||||||| |||||||| |||||| | | Sbjct 8902105 ATACATCGAGGGTGTACTCCTTGGAAAGCTGGTAGTCGCTGCCCTTCACAAACTTCAACT 8902046 Query 2411747 GATCCAGCGGGACGCCAATGT-GCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGG 2411805 || || || || |||||| ||| | |||||||||||| | |||||| | || Sbjct 8902045 TCTCGAGTGGAACTCCAATGGAGCTCAA-CATGGCCTTGATAACCTGCTCGTAGTACTGG 8901987 Query 2411806 CACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCG 2411865 || |||| | |||| |||||||| ||| ||||| |||| |||||| | |||| Sbjct 8901986 GTCCTCAGCTCCAAGAGGGACCACGGCGCCTTCATGTTGTCCAGGTAGGCGTGTAGGTCG 8901927 Query 2411866 GCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGC 2411925 ||||| ||||| | ||| || ||||||| ||||| ||||| | || | |||||| Sbjct 8901926 GCAAACAGGATGGTGACCTCGCAGCCGGCCTTCAGAAAATCGGCAATCTTCGACATGGGC 8901867 Query 2411926 ACAAAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGG 2411985 || |||||| | | ||| || || ||||||| ||| || ||||| || || ||| Sbjct 8901866 ACGAAGTAGGCGACATGTGGTTTTCCCGTCGTCGCCGTTCCCCAGTAGATCTTCAGATCC 8901807 Query 2411986 CGCTCGGCCATGAT 2411999 ||||| |||| ||| Sbjct 8901806 CGCTCTGCCAGGAT 8901793 >seq13744 Length=5790199 Score = 149 bits (164), Expect = 1e-29 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||||||||||||||| |||||||| | ||| | |||| ||||| | Sbjct 577263 GAGAAGCGCACCGACGACATCATCTCGTGGGACGCCGACTTCCTCAAGGTGGACCAGGGC 577322 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || ||||| || ||||||| || |||||||| || ||||||||| ||| || || | Sbjct 577323 ACACTCTTCGAACTGATCCTGGCGGCCAACTATCTGGACATCAAGGGCCTGCTGGAGCTC 577382 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 |||||||| ||||||||| | |||||||||||| | || ||||| |||||||||||| Sbjct 577383 ACCTGCAAGACTGTGGCCAACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACC 577442 Query 2035746 TTTAACATCAAG 2035757 || ||||||||| Sbjct 577443 TTCAACATCAAG 577454 >seq13745 Length=6960332 Score = 140 bits (154), Expect = 5e-27 Identities = 212/295 (72%), Gaps = 10/295 (3%) Strand=Plus/Plus Query 429528 GTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCGTCGCTCCAC 429587 || ||||| || |||||| || ||||| || || | |||||||||||| |||| ||| Sbjct 509136 GTGGAGCGGCATCTGCGCGACGACGACCTGGTCATCTTCAACCGGCAGCCGACGCTGCAC 509195 Query 429588 ATGGGGTCGATGCTCAACCACAAGGTG---GTGCCCATGCCC-GGTCGCACCTTCCGGCT 429643 | | | ||| | |||| |||| |||| ||||| |||| ||||||||| | Sbjct 509196 AAGATGAGTATGATGGGGCACAGGGTGAAGGTGC---TGCCCTGGTC-CACCTTCCGCAT 509251 Query 429644 CAACCTGGCCGTG-ACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGC 429702 |||||| | ||| || ||||||||||||| || |||||||||||||||||||||| Sbjct 509252 GAACCTGTC-GTGCACATCGCCCTACAACGCCGATTTCGACGGCGACGAGATGAACCTGC 509310 Query 429703 ACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACACCATGGGCGTGGCCCTCA 429762 |||||||||||||| | | | |||||||| || | ||| | | | ||| Sbjct 509311 ACGTGCCCCAGTCGATGGAGACGCGCGCCGAGGTGGAGAACATCCACATCACGCCCCGGC 509370 Query 429763 AGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGTGATGGACGCCCT 429817 || | | |||||||||||||||||||| |||| || | ||| |||| |||| Sbjct 509371 AGATCATCACGCCGCAGGCCAACAAGCCCGTCATGGGCATTGTGCAGGACACCCT 509425 Score = 105 bits (116), Expect = 1e-16 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 429032 GTCGGGCAAGCCCACCAAGGGCGTCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCG 429091 ||| |||||||| |||| | || || || || ||||||||||||||||| ||||| Sbjct 508793 GTCCGGCAAGCCGCTGAAGGCCATCAAGGCCCGGTTGAAGGGCAAGGAGGGCCGCATCCG 508852 Query 429092 CGGCAATTGCATGGGCAAGCGCGTCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCC 429151 ||||| | ||||||||||| || |||| | || || | ||||| | ||| || || Sbjct 508853 TGGCAACTTGATGGGCAAGCGTGTGGACTTCTCCGCCCGTACTGTCATTACTCCGGATCC 508912 Query 429152 CGAAATCGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCC 429211 | | | ||| ||| ||||||| ||||| |||| | ||| || ||||| || Sbjct 508913 CAATCTGCGCATCGACCAGGTGGGTGTGCCGCGCTCCATCGCCCAGAATCTGACCTTCCC 508972 Query 429212 CGAGCGCGTGACGCCCTT 429229 ||||| ||||||||||| Sbjct 508973 CGAGCTGGTGACGCCCTT 508990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914783856160811