Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq13748 96.9 3e-15 >seq13748 Length=23293914 Score = 96.9 bits (106), Expect = 3e-15 Identities = 108/139 (78%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 105081 GGACTGCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCC 105140 || ||||||||||| || || ||||||||||| || | || ||||||||||| |||| || Sbjct 5397402 GGTCTGCACGGCTTCCATGTGCACGAGTTCGGAGACAACACCAACGGCTGCATGTCCTCC 5397343 Query 105141 GGCGAGCACTTCAACCC-TACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAA-AGGC 105198 ||| || |||||||| |||| || | | ||||||||||| | || | |||| | | Sbjct 5397342 GGCCCCCATTTCAACCCCTACG-GCAAGGAGCACGGCGCTCCCGGCGATG-AGAACCGTC 5397285 Query 105199 ACGTCGGCGACCTGGGCAA 105217 || | |||||| ||||||| Sbjct 5397284 ACTTGGGCGACTTGGGCAA 5397266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398809961835061