Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq13746 140 2e-28 seq13748 116 3e-21 seq13745 86.0 5e-12 >seq13746 Length=16180835 Score = 140 bits (154), Expect = 2e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 ||||||||||| || | || || || || ||||||||||| || | | ||||||| | Sbjct 14254432 CGCAGCACCAAGTGCAAGGTAGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGACCA 14254373 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || |||||||| | |||| | |||||||| || ||||| || |||||| Sbjct 14254372 TCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 14254313 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | ||||||| |||| | || || || |||| || |||||||| || Sbjct 14254312 TCCTG-AATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGAT 14254254 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || | ||| ||||| || |||||||| || Sbjct 14254253 GGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATCTT 14254215 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| ||||||| ||| || || || || || || ||||| || || | | Sbjct 2088093 CCACCGCGCAGACGGAGCACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 2088034 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || || || ||||| || | |||| | |||||||| || || Sbjct 2088033 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 2087974 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||| || | || || ||| | || | ||||| || | || || Sbjct 2087973 ATGCCCTCTTTGTCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCCGACGGCTCGACC 2087914 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | |||||| || || || ||||| Sbjct 2087913 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2087867 >seq13748 Length=23293914 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || ||||| || || ||||| || || || || || || |||| Sbjct 9536537 CCGCCTCGCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 9536478 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| ||||| || || || || | ||||| | ||||| || || || Sbjct 9536477 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGG 9536418 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||||||| ||| || | || || | || | || ||||| | || || Sbjct 9536417 ATTCCCTCCTTGTCTTG-AATCTTGGCCTTCACGTTCTCGATGGTATCAGAGGGCTCCAC 9536359 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || ||||| ||||| |||||||| ||||| ||||||||||| Sbjct 9536358 CTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCATTTT 9536308 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | || ||| ||||||||||| || || || || || || ||||| || |||| Sbjct 9538818 TCCTCCGCGCAGACGGAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 9538759 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| ||| ||||| || || || || | ||||| | ||||| || || || Sbjct 9538758 CAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGG 9538699 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || ||||| ||||| || ||| || | || || | || | ||||| || | || | Sbjct 9538698 GATTCCCTCCTTGTCCTG-AATCTTGGCCTTCACGTTCTCGATGGTGTCGGAGGGCTCAA 9538640 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| || || || || || || || ||||| || || || ||||||||| Sbjct 9538639 CTTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATCTGCATT 9538590 >seq13745 Length=6960332 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| ||| || || || || || || ||||| || || | | |||||| Sbjct 841835 CGGAGCACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCG 841894 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || || || | |||| | |||||||| || || || ||||| ||| Sbjct 841895 TCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATGCCCTCCTTG 841954 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| | || | ||||| || | || || || || || || Sbjct 841955 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATG 842014 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||| | ||| || || || |||||||| Sbjct 842015 GTTTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385154650383609