Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq13749 163 2e-34 seq13737 138 8e-27 >seq13749 Length=23697760 Score = 163 bits (180), Expect = 2e-34 Identities = 680/1061 (64%), Gaps = 19/1061 (2%) Strand=Plus/Minus Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 ||| || ||||| || |||||||| || ||||| || || ||||| ||||||| || || Sbjct 7675784 GGCGGTAACATTCAGGATACCATTAGCGTCCAAGTCGAAGGTGACGTCAATTTTTGGCAC 7675725 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 ||||| | ||||||||||| || || || ||||| || || ||| || || || Sbjct 7675724 GCCTCTGGGTGCAGGTGGGATGCCAGTCAGGTTGAATGTGCCAAGCACATTGTTGTCCTT 7675665 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 ||| || || || |||||||| | |||||||| || ||| ||||||||||| || Sbjct 7675664 AGTCAAGGCACGCTCTCCCTCGAAGACCTGGATAGTTACCGCAGGTTGATTATCTGCGTA 7675605 Query 281605 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || || || |||| | || |||||||| |||| | ||||| | ||||| Sbjct 7675604 TGTGGTGAAGGTCTTGGACTGCTTGCAAGGAATGCGGCTGTTGCGCTCAATCAGCTTGGT 7675545 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG---GAC 281721 ||| | || || || || || | || | || || |||| ||||| || || ||| Sbjct 7675544 CATCACTCCGCCGGCAGTCTCGATGCCCAATGATAGCGGAGCCACATCCACCAGCAAGAC 7675485 Query 281722 AATATTT-TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780 | ||| | | | || ||| | || |||||| ||||| ||||| || || | Sbjct 7675484 ATCCTTTATCTGGCTGCTC-TCA---TCGCCGGAAAGAATGGCTGCCTGAATTGCCGCTC 7675429 Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840 |||| || || |||||||||||||| | | |||||| | || || || || Sbjct 7675428 CATAGGCCACCGCTTCATCAGGATTGATGGACAGATTTAGAGTCTTTCCGCCAAAGAAGC 7675369 Query 281841 TTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899 || || | ||| ||||| ||||| || | |||||||| || | ||||| ||| Sbjct 7675368 CCTGCAGCAGAT-TCTGAACCTTGGGAATGCGGGTGGATCCTCCTACCAGAACAATATCA 7675310 Query 281900 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCA 281959 || | ||| ||| |||| || | ||| | | ||||| ||||| | || | Sbjct 7675309 TGAATCTGGCCTTTGTCCATCTTGGCATCGTTCAGGGCCTTTTCCACGGGCTGCAGTGTA 7675250 Query 281960 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA 282019 | || | ||| || | || ||||| |||| | | || | | Sbjct 7675249 TTGCGGAAGAGATCTCCGCACAACTCCTCGAACCGGGCTCGGCTCACCTTGGTGTAGAAG 7675190 Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 ||| || ||||| | | ||||| || || | || | ||| ||| || | || Sbjct 7675189 TCATGACCCTCGAAGAGGGCATCAATCTCTATGGAAGCCTCAGTGCTAGAGGACAATGTG 7675130 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCA 282137 || || || ||||| ||| || | ||| | || | || | ||||| | || Sbjct 7675129 CGCTTGGCGCGTTCGGCTGCAGTTCGTAGGCGTCTCAGAGC--ACGAGGATTGGAACGCA 7675072 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCA 282196 ||| | ||| | || | |||||| ||||| | || ||| || || || || ||| Sbjct 7675071 GATCCTTCTTAAACTTCCGCTTGAACTCTTCTGC-CAGATGGTTCACCAGCCGGTTGTCA 7675013 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCA 282253 || || || || |||| | ||| | || | |||| | || | |||||| ||| Sbjct 7675012 AAGTCCTCGCCACCCAGATGAGTGTCGCCAGCTGTAGACCGCACCTCGAAAAGAGATCCT 7674953 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 || || | || ||||| | || || || || ||||||| || || || || ||| Sbjct 7674952 TCGTCGATAGTCAAAATGGAGACGTCGAAAGTGCCGCCACCCAAGTCGAAGATGAGCACA 7674893 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 || ||| | ||||||| || || || || || | || || ||||| || || Sbjct 7674892 TTGCGCTCTCCCTTAAGGTTTTTGTCGAGTCCGTAGGCCAGGGCTGCGGCAGTGGGCTCG 7674833 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || || || | | ||||| | |||||||| ||| ||||| || ||||| || | Sbjct 7674832 TTGATTATGCGAAGGACATTTAATCCAGCAATCGCTCCCGCATCCTTGGTGGCCTGGCGC 7674773 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 282474 || || ||||||||||| || || || ||||| || ||||| Sbjct 7674772 TGGGAGTCGTTAAAATAGGCCGGCACCGTAATGACTGCATC 7674732 >seq13737 Length=3535662 Score = 138 bits (152), Expect = 8e-27 Identities = 454/703 (65%), Gaps = 2/703 (0%) Strand=Plus/Plus Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238 || || ||||| || ||||| || || |||||||| | || | || | || | | | Sbjct 184033 GTGACTAGACGGTTGTCAAAGTCCTCGCCTCCCAAATGCGTGTCACCGGCAGTGGATTTG 184092 Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298 || | ||| | || || || | |||| || | ||||| ||| || || |||| | Sbjct 184093 ACCTCGAAGATGCCGTCATCGATCGACAGAATGGACACATCGAAGGTGCCGCCGCCCAGA 184152 Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358 || ||||| || || || || | || || || ||||| || |||| |||| Sbjct 184153 TCGAAAATGAGCACGTTGCGCTCGCCAACGGCCTTCTTGTCCAGACCGTAAGCAATAGCA 184212 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || || || || || || || || | || |||||| | || ||||| | || || || Sbjct 184213 GCGGCCGTGGGCTCGTTGATGATACGCAGAACATTCAATCCGGCAATGGTACCGGCGTCC 184272 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || || || | || || ||||| || || || || ||||| || ||||||| || Sbjct 184273 TTGGTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACAGTGATGACGGCATTGGTC 184332 Query 282479 ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA 282538 || || || | ||| || || || | ||||| || | | | ||| || || Sbjct 184333 ACAGTCTTGCCCAGATAGGCCTCGGCGGTCTCCTTCATCTTGGTGAGGACCATAGAGGAG 184392 Query 282539 ATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 282597 || | || || ||| | | ||| |||| | || | || || | | || || Sbjct 184393 ATCTCCTCGGG-GAAGAAGGTCTTCTTCTCATCCTTGTAGGTGACCTCGATCTTGGGCTT 184451 Query 282598 ATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTC 282657 |||| | | ||| | || ||||| | ||||| || || || ||| || Sbjct 184452 GCCGTCAACGCTGACAACCTCGAAGGGCCAGTGCTTCATGTCGGACTGCACAGCAGAATC 184511 Query 282658 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGC 282717 | || | | |||||| | || || ||||| || || || | ||| || || | || Sbjct 184512 GTCGAACTTGCGACCAATGAGACGCTTAGCATCGAAGATCGTCTGGGTCGGGTTCATCGC 184571 Query 282718 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 282777 | || | ||||| ||||| || |||||| | || ||||| || || | |||||| || Sbjct 184572 CACCTGGTTCTTGGCAGCATCGCCGATCAGACGCTCCGTCTCGGTGAAGGCAACATAGGA 184631 Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 282837 ||| || || |||||||| || || || ||||| || ||||| || |||| || | || Sbjct 184632 TGGTGTGGTACGATTACCCTGGTCGTTGGCAATGATCTCAACCTTGCCATGCTGGAACAC 184691 Query 282838 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 || ||||| | || || || ||||||||||||| |||| Sbjct 184692 GCCCACACAGGAGTAGGTGGTGCCCAAATCAATACCAACAGCA 184734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739955382203274