Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq13749 163 2e-34
seq13737 138 8e-27
>seq13749
Length=23697760
Score = 163 bits (180), Expect = 2e-34
Identities = 680/1061 (64%), Gaps = 19/1061 (2%)
Strand=Plus/Minus
Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484
||| || ||||| || |||||||| || ||||| || || ||||| ||||||| || ||
Sbjct 7675784 GGCGGTAACATTCAGGATACCATTAGCGTCCAAGTCGAAGGTGACGTCAATTTTTGGCAC 7675725
Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544
||||| | ||||||||||| || || || ||||| || || ||| || || ||
Sbjct 7675724 GCCTCTGGGTGCAGGTGGGATGCCAGTCAGGTTGAATGTGCCAAGCACATTGTTGTCCTT 7675665
Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604
||| || || || |||||||| | |||||||| || ||| ||||||||||| ||
Sbjct 7675664 AGTCAAGGCACGCTCTCCCTCGAAGACCTGGATAGTTACCGCAGGTTGATTATCTGCGTA 7675605
Query 281605 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664
|| || || |||| | || |||||||| |||| | ||||| | |||||
Sbjct 7675604 TGTGGTGAAGGTCTTGGACTGCTTGCAAGGAATGCGGCTGTTGCGCTCAATCAGCTTGGT 7675545
Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG---GAC 281721
||| | || || || || || | || | || || |||| ||||| || || |||
Sbjct 7675544 CATCACTCCGCCGGCAGTCTCGATGCCCAATGATAGCGGAGCCACATCCACCAGCAAGAC 7675485
Query 281722 AATATTT-TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780
| ||| | | | || ||| | || |||||| ||||| ||||| || || |
Sbjct 7675484 ATCCTTTATCTGGCTGCTC-TCA---TCGCCGGAAAGAATGGCTGCCTGAATTGCCGCTC 7675429
Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840
|||| || || |||||||||||||| | | |||||| | || || || ||
Sbjct 7675428 CATAGGCCACCGCTTCATCAGGATTGATGGACAGATTTAGAGTCTTTCCGCCAAAGAAGC 7675369
Query 281841 TTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899
|| || | ||| ||||| ||||| || | |||||||| || | ||||| |||
Sbjct 7675368 CCTGCAGCAGAT-TCTGAACCTTGGGAATGCGGGTGGATCCTCCTACCAGAACAATATCA 7675310
Query 281900 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCA 281959
|| | ||| ||| |||| || | ||| | | ||||| ||||| | || |
Sbjct 7675309 TGAATCTGGCCTTTGTCCATCTTGGCATCGTTCAGGGCCTTTTCCACGGGCTGCAGTGTA 7675250
Query 281960 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA 282019
| || | ||| || | || ||||| |||| | | || | |
Sbjct 7675249 TTGCGGAAGAGATCTCCGCACAACTCCTCGAACCGGGCTCGGCTCACCTTGGTGTAGAAG 7675190
Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079
||| || ||||| | | ||||| || || | || | ||| ||| || | ||
Sbjct 7675189 TCATGACCCTCGAAGAGGGCATCAATCTCTATGGAAGCCTCAGTGCTAGAGGACAATGTG 7675130
Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCA 282137
|| || || ||||| ||| || | ||| | || | || | ||||| | ||
Sbjct 7675129 CGCTTGGCGCGTTCGGCTGCAGTTCGTAGGCGTCTCAGAGC--ACGAGGATTGGAACGCA 7675072
Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCA 282196
||| | ||| | || | |||||| ||||| | || ||| || || || || |||
Sbjct 7675071 GATCCTTCTTAAACTTCCGCTTGAACTCTTCTGC-CAGATGGTTCACCAGCCGGTTGTCA 7675013
Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCA 282253
|| || || || |||| | ||| | || | |||| | || | |||||| |||
Sbjct 7675012 AAGTCCTCGCCACCCAGATGAGTGTCGCCAGCTGTAGACCGCACCTCGAAAAGAGATCCT 7674953
Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313
|| || | || ||||| | || || || || ||||||| || || || || |||
Sbjct 7674952 TCGTCGATAGTCAAAATGGAGACGTCGAAAGTGCCGCCACCCAAGTCGAAGATGAGCACA 7674893
Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373
|| ||| | ||||||| || || || || || | || || ||||| || ||
Sbjct 7674892 TTGCGCTCTCCCTTAAGGTTTTTGTCGAGTCCGTAGGCCAGGGCTGCGGCAGTGGGCTCG 7674833
Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433
|| || || | | ||||| | |||||||| ||| ||||| || ||||| || |
Sbjct 7674832 TTGATTATGCGAAGGACATTTAATCCAGCAATCGCTCCCGCATCCTTGGTGGCCTGGCGC 7674773
Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 282474
|| || ||||||||||| || || || ||||| || |||||
Sbjct 7674772 TGGGAGTCGTTAAAATAGGCCGGCACCGTAATGACTGCATC 7674732
>seq13737
Length=3535662
Score = 138 bits (152), Expect = 8e-27
Identities = 454/703 (65%), Gaps = 2/703 (0%)
Strand=Plus/Plus
Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238
|| || ||||| || ||||| || || |||||||| | || | || | || | | |
Sbjct 184033 GTGACTAGACGGTTGTCAAAGTCCTCGCCTCCCAAATGCGTGTCACCGGCAGTGGATTTG 184092
Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298
|| | ||| | || || || | |||| || | ||||| ||| || || |||| |
Sbjct 184093 ACCTCGAAGATGCCGTCATCGATCGACAGAATGGACACATCGAAGGTGCCGCCGCCCAGA 184152
Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358
|| ||||| || || || || | || || || ||||| || |||| ||||
Sbjct 184153 TCGAAAATGAGCACGTTGCGCTCGCCAACGGCCTTCTTGTCCAGACCGTAAGCAATAGCA 184212
Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418
|| || || || || || || || | || |||||| | || ||||| | || || ||
Sbjct 184213 GCGGCCGTGGGCTCGTTGATGATACGCAGAACATTCAATCCGGCAATGGTACCGGCGTCC 184272
Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478
|| || || || | || || ||||| || || || || ||||| || ||||||| ||
Sbjct 184273 TTGGTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACAGTGATGACGGCATTGGTC 184332
Query 282479 ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA 282538
|| || || | ||| || || || | ||||| || | | | ||| || ||
Sbjct 184333 ACAGTCTTGCCCAGATAGGCCTCGGCGGTCTCCTTCATCTTGGTGAGGACCATAGAGGAG 184392
Query 282539 ATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 282597
|| | || || ||| | | ||| |||| | || | || || | | || ||
Sbjct 184393 ATCTCCTCGGG-GAAGAAGGTCTTCTTCTCATCCTTGTAGGTGACCTCGATCTTGGGCTT 184451
Query 282598 ATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTC 282657
|||| | | ||| | || ||||| | ||||| || || || ||| ||
Sbjct 184452 GCCGTCAACGCTGACAACCTCGAAGGGCCAGTGCTTCATGTCGGACTGCACAGCAGAATC 184511
Query 282658 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGC 282717
| || | | |||||| | || || ||||| || || || | ||| || || | ||
Sbjct 184512 GTCGAACTTGCGACCAATGAGACGCTTAGCATCGAAGATCGTCTGGGTCGGGTTCATCGC 184571
Query 282718 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 282777
| || | ||||| ||||| || |||||| | || ||||| || || | |||||| ||
Sbjct 184572 CACCTGGTTCTTGGCAGCATCGCCGATCAGACGCTCCGTCTCGGTGAAGGCAACATAGGA 184631
Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 282837
||| || || |||||||| || || || ||||| || ||||| || |||| || | ||
Sbjct 184632 TGGTGTGGTACGATTACCCTGGTCGTTGGCAATGATCTCAACCTTGCCATGCTGGAACAC 184691
Query 282838 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880
|| ||||| | || || || ||||||||||||| ||||
Sbjct 184692 GCCCACACAGGAGTAGGTGGTGCCCAAATCAATACCAACAGCA 184734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3739955382203274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |