Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 163 6e-35
seq13748 138 2e-27
seq13745 134 3e-26
seq13747 114 3e-20
>seq13746
Length=16180835
Score = 163 bits (180), Expect = 6e-35
Identities = 165/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || ||||||| ||||| || ||||| || ||||| ||||| || | | |||
Sbjct 14254432 CGCAGCACCAAGTGCAAGGTAGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGACCA 14254373
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || ||||| ||||| || | || ||||||||||| |||||||| ||
Sbjct 14254372 TCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 14254313
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| ||||| |||||||| || ||||| ||||| || || | ||| ||
Sbjct 14254312 TCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATG 14254253
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 14254252 GTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 14254218
Score = 98.7 bits (108), Expect = 2e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || ||| || || | |||||||| || || ||||| || || || || |
Sbjct 2088095 TACCACCGCGCAGACGGAGCACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 2088036
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | ||| || || || || || || || ||||| || | || ||||||||||
Sbjct 2088035 AAAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAG 2087976
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || || || || || ||||| || || ||||| || || || || || || |
Sbjct 2087975 GGATGCCCTCTTTGTCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCCGACGGCTCGA 2087916
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || |||||||| || | || || || || || |||||
Sbjct 2087915 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2087867
>seq13748
Length=23293914
Score = 138 bits (152), Expect = 2e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||| || ||| || || ||||| || || || || ||||| ||||| || || |
Sbjct 9536767 TACCGCCTCGCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCG 9536708
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || || || || || ||||| || ||||| | | || || ||||| |
Sbjct 9536707 ACAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGG 9536648
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||| ||||| ||||||||||| || || || || || || |||||| || || |
Sbjct 9536647 GGATTCCCTCCTTGTCTTGAATCTTGGCCTTCACGTTCTCGATGGTATCAGAGGGCTCCA 9536588
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || ||||| || ||||| |||||||| || ||||||||
Sbjct 9536587 CCTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATCTGCAT 9536539
Score = 132 bits (146), Expect = 9e-26
Identities = 176/243 (72%), Gaps = 1/243 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||| || ||| || || ||||| || || || || ||||| ||||| || || |
Sbjct 9536539 TACCGCCTCGCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCG 9536480
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || || || || || ||||| || ||||| | | || || ||||| |
Sbjct 9536479 ACAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGG 9536420
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||| ||||| ||||||||||| || || || || || || |||||| || || |
Sbjct 9536419 GGATTCCCTCCTTGTCTTGAATCTTGGCCTTCACGTTCTCGATGGTATCAGAGGGCTCCA 9536360
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTT 82821
| |||| || || || || || ||||| || || ||||| ||||||||| || ||| |
Sbjct 9536359 CCTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCATT-TTGGATTAT 9536301
Query 82822 TCT 82824
|||
Sbjct 9536300 TCT 9536298
>seq13745
Length=6960332
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | || ||| || || ||||| || || || || ||||| || || || || ||
Sbjct 841367 CCTCCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 841426
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | ||||| || || || || || || ||||| || | || |||||||||||
Sbjct 841427 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 841486
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| || || ||||| ||||| || || || || ||
Sbjct 841487 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACC 841546
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || |||||||| |||| ||||| || || ||||||||
Sbjct 841547 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 841593
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||||| ||| || |||| ||| || || ||||| || || || || ||
Sbjct 840911 CCGCCGCGCAGACGCAAAACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 840970
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | ||||| || || || || || || ||||| || | || |||||||||||
Sbjct 840971 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 841030
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||| ||||| || || ||||| || || ||||| ||||| || || || || ||
Sbjct 841031 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCGGATGGCTCGACC 841090
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| || | ||||| || || ||||||||
Sbjct 841091 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 841137
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || ||||| || || || || ||||| || || || || || || | | |||
Sbjct 841151 CGGAGTACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCG 841210
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || || ||||| || | || ||||||||||| ||||| |||||
Sbjct 841211 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATTCCCTCCTTG 841270
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| ||||| || || || || || |||| || ||
Sbjct 841271 TCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATG 841330
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 841331 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 841365
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || ||||| || || || || ||||| || || || || || || | | |||
Sbjct 842063 CGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCG 842122
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || || ||||| || | || ||||||||||| || || |||||
Sbjct 842123 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCCTCCTTG 842182
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| ||||| || || || || || |||| || ||
Sbjct 842183 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATG 842242
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||| ||||| || || ||||||||
Sbjct 842243 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842277
>seq13747
Length=19884421
Score = 114 bits (126), Expect = 3e-20
Identities = 202/289 (70%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 198339 CTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGA 198398
|| |||||| | | ||| | || || || | || || || ||||| | || | |
Sbjct 16052057 CTGTGGAATTCGGCCCAATTGCAACTGGTACGTGAGGGCAAGATGCACGGCTTCCTGCGC 16052116
Query 198399 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTT-GAGTTA 198457
|||||||||||||| ||||| || ||||||||| || || || | || | ||||
Sbjct 16052117 ATGTACTGGGCTAAGAAGATCCTCGAATGGACAGAGACTCCCGAGCAGGCCCTAGAGTAC 16052176
Query 198458 TAGTATCTATCTAAACAATAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAG 198516
|||| || || |||||||| || ||||| ||| || || || |||||||| |
Sbjct 16052177 GCCATTCTA-CTTAATGATAAGTACAGCCTGGACGG-ACGAGACCCCAATGGATACGTGG 16052234
Query 198517 GTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTG 198576
| |||||||||||||| | ||| | ||||| | ||||| ||| || |||| ||||
Sbjct 16052235 GGTGTATGTGGTCTATCGGAGGAGTCCATGACATGGGCTGGAAGGAACGATCTATCTTTG 16052294
Query 198577 GGAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGATGT 198625
|||||||| | || ||||||||| | || | | | ||||| |||||
Sbjct 16052295 GGAAGATACGCTACATGAATTATCAAGGCTGTCGGCGTAAATTCGATGT 16052343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981654242240911
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