Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq13747 109 1e-18 >seq13747 Length=19884421 Score = 109 bits (120), Expect = 1e-18 Identities = 185/263 (70%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 183022 CTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGA 183081 || |||||| | | ||| | || || | | || || || ||||| | || | || Sbjct 16052057 CTGTGGAATTCGGCCCAATTGCAACTGGTACGTGAGGGCAAGATGCACGGCTTCCTGCGC 16052116 Query 183082 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTT-GAGTTA 183140 |||||||||||||| ||||| || ||||||||| ||||| || | || | |||| Sbjct 16052117 ATGTACTGGGCTAAGAAGATCCTCGAATGGACAGAGACTCCCGAGCAGGCCCTAGAGTAC 16052176 Query 183141 TAGTATCTATATGAACAATAAGTACGAACTAGACGGTACG-GATCCTAACGGATACGTAG 183199 |||| | || |||||||| || ||||| ||| || || || |||||||| | Sbjct 16052177 GCCATTCTACTT-AATGATAAGTACAGCCTGGACGG-ACGAGACCCCAATGGATACGTGG 16052234 Query 183200 GTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTG 183259 | |||||||||||||| | ||| | || || | | ||||| ||| || |||| |||| Sbjct 16052235 GGTGTATGTGGTCTATCGGAGGAGTCCATGACATGGGCTGGAAGGAACGATCTATCTTTG 16052294 Query 183260 GAAAGATAAGATATATGAATTAT 183282 | |||||| | || ||||||||| Sbjct 16052295 GGAAGATACGCTACATGAATTAT 16052317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903255937492640