Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq13746 125 2e-23 >seq13746 Length=16180835 Score = 125 bits (138), Expect = 2e-23 Identities = 370/562 (66%), Gaps = 19/562 (3%) Strand=Plus/Minus Query 110605 CTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATAT---CGCAA 110661 |||| || |||||| || |||| ||| ||||| |||| || | || || || Sbjct 14159764 CTGGTGGTATTGGTCTTAACGTCCATTGCATTCGTGCAAAGGGTACCTCGATTTGCGGAA 14159705 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | ||| || | || | ||| || ||||| ||| | |||||||| ||| || || Sbjct 14159704 C---GAATGGCACATCCAATGGCCTGGTTCCTATGCTGAGAGTCTTTAACAACGTGGCGC 14159648 Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778 |||||| |||| |||||| ||| | || | ||||| || ||||| || || | Sbjct 14159647 GGTATGTGGATCAGGGTGGTGGCAAGCGGCCGGGAGCCTTTGCCATTTATCTGGAGCCCT 14159588 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 ||||||| ||| ||||||| || | || ||| || ||| || ||||| || Sbjct 14159587 GGCATTCGGATGTATTTGAGTTTCTGGACCTTAAGAAGAATACTGGCAAGGAAGAGCATC 14159528 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 |||| || ||||| || ||||| ||||||| ||||| | ||||||||||| || | | Sbjct 14159527 GAGCCCGCGATTTGTTCTATGCCCTGTGGATACCAGATCTCTTCATGAAACGAGTGGAGG 14159468 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958 |||| ||||| | |||||||| ||| | ||||| || |||||| | | Sbjct 14159467 CCAATGAGGACTGGTCGTTAATGTGTCCCCATAAATGCCCTGGCCTCCATGATGTGTGGG 14159408 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCG-CAAACAA 111017 | | ||||||||| | || || | ||||| | || || ||| | | || ||| | | Sbjct 14159407 GCGATGAGTTTGAAAAACTCTATGTGAAATACG-AACAGGAGGGACG---CGCCAATCGA 14159352 Query 111018 A---TTCCAGCTCAAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAAC 111073 | | ||| | || ||| ||||| ||| |||| || ||||| || ||||||| Sbjct 14159351 ACTGTGAAAGCAC-AGTCCTTGTGGTTTGCTATCATTGAGTCGCAAGTGGAGACTGGAAA 14159293 Query 111074 TCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAAC 111133 |||||| || ||| || || || || || || ||| |||| | || || Sbjct 14159292 TCCTTACATGCTGTTCAAGGACGCCTGCAACCGAAAGAGCAACCAACAGAATGTGGGCAC 14159233 Query 111134 AATTAAGTCTAGTAATTTGTGC 111155 ||||||| || ||| ||||| Sbjct 14159232 CATTAAGTGCAGCAATCTGTGC 14159211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186603732169789