Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq13748 95.1 3e-14 seq3328 91.5 3e-13 seq13746 87.8 4e-12 >seq13748 Length=23293914 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||| ||||||| || || ||||| |||| || ||| Sbjct 9537475 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9537534 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || ||||| || ||| || || | ||||||||||||||| Sbjct 9537535 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9537594 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | ||| || | || |||||| ||||||| ||||| || |||||| Sbjct 9537595 CAGCTCGAGGATGGCCGAACTCTGTCGGACTACAACATCCAGAAGGAGTCCACCCTTCAC 9537654 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||| ||||||| || || ||||| |||| || ||| Sbjct 9538387 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9538446 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || ||||| || ||| || || | ||||||||||||||| Sbjct 9538447 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9538506 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | ||| || | || |||||| ||||||| ||||| || |||||| Sbjct 9538507 CAGCTCGAGGATGGCCGAACTCTGTCGGACTACAACATCCAGAAGGAGTCCACCCTTCAC 9538566 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| ||| ||||| | || |||||||| ||||| |||| ||||| Sbjct 9536308 AAAATG---CAGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAG 9536364 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||| || |||| || ||| ||||||||||| || || ||||| || Sbjct 9536365 CCCTCTGATACCATCGAGAACGTGAAGGCCAAGATTCAAGACAAGGAGGGAATCCCCCCA 9536424 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| || | | |||||||||||||||||| | || ||||| | || || | || Sbjct 9536425 GACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCGGAC 9536484 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||||| ||||| || || ||| Sbjct 9536485 TACAATATCCAGAAGGAGTCCACCCTCCAC 9536514 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||| ||||||| || || ||||| |||| || ||| Sbjct 9536791 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9536850 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || ||||| || ||| || || | ||||||||||||||| Sbjct 9536851 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9536910 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || |||||| | ||| | |||| ||||| ||||||| ||||| || || ||| Sbjct 9536911 CAGCTCGAGGATGGACGTACTCTATCCGACTACAATATCCAGAAGGAGTCCACCCTCCAC 9536970 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||| ||||||| || || ||||| |||| || ||| Sbjct 9538159 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9538218 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || ||||| || ||| || || | ||||||||||||||| Sbjct 9538219 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9538278 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | ||| || | || |||||| ||||||| || || || |||||| Sbjct 9538279 CAGCTCGAGGATGGCCGAACTCTGTCGGACTACAACATCCAGAAGGAATCCACCCTTCAC 9538338 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||| ||||||| || || ||||| |||| || ||| Sbjct 9537247 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9537306 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || ||||| || ||| || || | ||||||||||||||| Sbjct 9537307 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9537366 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | || || | || |||||| ||||||| || || || |||||| Sbjct 9537367 CAGCTCGAGGATGGCCGCACCCTGTCGGACTACAACATCCAGAAGGAATCCACCCTTCAC 9537426 Score = 84.2 bits (92), Expect = 5e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||| ||||||| || || ||||| |||| || ||| Sbjct 9538615 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9538674 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || ||||| || ||| || | | ||||||||||||||| Sbjct 9538675 AAGATTCAGGACAAGGAGGGAATCCCCCCAGACCAGCAGCGTTTGATCTTCGCCGGAAAG 9538734 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| | || ||||| | || || | || |||||| ||||||| ||||| ||||| || Sbjct 9538735 CAGCTCGAGGATGGCCGCACCCTGTCGGACTACAACATCCAGAAGGAGTCGACTCTCCA 9538793 >seq3328 Length=1182 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||| ||||||| || || ||||| |||| || ||| Sbjct 251 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 310 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || ||||| || ||| || | | ||||||||||||||| Sbjct 311 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGTTTGATCTTCGCCGGAAAG 370 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | ||| || | || |||||| ||||||| ||||| || |||||| Sbjct 371 CAGCTCGAGGATGGCCGAACTCTGTCGGACTACAACATCCAGAAGGAGTCCACCCTTCAC 430 >seq13746 Length=16180835 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || |||||| | || || ||| || || || ||||| Sbjct 14254233 AAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCGGATACCATCGAAAAT 14254292 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || |||||| || |||||||||||| || || || | || ||||| Sbjct 14254293 GTCAAAGCCAA-GATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTGATCTT 14254351 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| |||||||||| | || | | || || ||| | ||||| ||||| Sbjct 14254352 CGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTATAACATTCAGAAGGAGTC 14254411 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| | ||| | || || | ||||| Sbjct 14254412 TACCTTGCACTTGGTGCTGCGCCTTCG 14254438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181612611555829