Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq13748 95.1 3e-14
seq3328 91.5 3e-13
seq13746 87.8 4e-12
>seq13748
Length=23293914
Score = 95.1 bits (104), Expect = 3e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || ||||| ||||||| || || ||||| |||| || |||
Sbjct 9537475 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9537534
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || ||||| || ||| || || | |||||||||||||||
Sbjct 9537535 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9537594
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | ||| || | || |||||| ||||||| ||||| || ||||||
Sbjct 9537595 CAGCTCGAGGATGGCCGAACTCTGTCGGACTACAACATCCAGAAGGAGTCCACCCTTCAC 9537654
Score = 95.1 bits (104), Expect = 3e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || ||||| ||||||| || || ||||| |||| || |||
Sbjct 9538387 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9538446
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || ||||| || ||| || || | |||||||||||||||
Sbjct 9538447 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9538506
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | ||| || | || |||||| ||||||| ||||| || ||||||
Sbjct 9538507 CAGCTCGAGGATGGCCGAACTCTGTCGGACTACAACATCCAGAAGGAGTCCACCCTTCAC 9538566
Score = 93.3 bits (102), Expect = 1e-13
Identities = 147/210 (70%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| ||||| | || |||||||| ||||| |||| |||||
Sbjct 9536308 AAAATG---CAGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAG 9536364
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
||||| || |||| || ||| ||||||||||| || || ||||| ||
Sbjct 9536365 CCCTCTGATACCATCGAGAACGTGAAGGCCAAGATTCAAGACAAGGAGGGAATCCCCCCA 9536424
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| || | | |||||||||||||||||| | || ||||| | || || | ||
Sbjct 9536425 GACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCGGAC 9536484
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||||| ||||||| ||||| || || |||
Sbjct 9536485 TACAATATCCAGAAGGAGTCCACCCTCCAC 9536514
Score = 91.5 bits (100), Expect = 3e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || ||||| ||||||| || || ||||| |||| || |||
Sbjct 9536791 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9536850
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || ||||| || ||| || || | |||||||||||||||
Sbjct 9536851 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9536910
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || |||||| | ||| | |||| ||||| ||||||| ||||| || || |||
Sbjct 9536911 CAGCTCGAGGATGGACGTACTCTATCCGACTACAATATCCAGAAGGAGTCCACCCTCCAC 9536970
Score = 91.5 bits (100), Expect = 3e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || ||||| ||||||| || || ||||| |||| || |||
Sbjct 9538159 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9538218
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || ||||| || ||| || || | |||||||||||||||
Sbjct 9538219 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9538278
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | ||| || | || |||||| ||||||| || || || ||||||
Sbjct 9538279 CAGCTCGAGGATGGCCGAACTCTGTCGGACTACAACATCCAGAAGGAATCCACCCTTCAC 9538338
Score = 86.0 bits (94), Expect = 1e-11
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || ||||| ||||||| || || ||||| |||| || |||
Sbjct 9537247 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9537306
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || ||||| || ||| || || | |||||||||||||||
Sbjct 9537307 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAG 9537366
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | || || | || |||||| ||||||| || || || ||||||
Sbjct 9537367 CAGCTCGAGGATGGCCGCACCCTGTCGGACTACAACATCCAGAAGGAATCCACCCTTCAC 9537426
Score = 84.2 bits (92), Expect = 5e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || ||||| ||||||| || || ||||| |||| || |||
Sbjct 9538615 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 9538674
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || || || ||||| || ||| || | | |||||||||||||||
Sbjct 9538675 AAGATTCAGGACAAGGAGGGAATCCCCCCAGACCAGCAGCGTTTGATCTTCGCCGGAAAG 9538734
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
||| | || ||||| | || || | || |||||| ||||||| ||||| ||||| ||
Sbjct 9538735 CAGCTCGAGGATGGCCGCACCCTGTCGGACTACAACATCCAGAAGGAGTCGACTCTCCA 9538793
>seq3328
Length=1182
Score = 91.5 bits (100), Expect = 3e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || ||||| ||||||| || || ||||| |||| || |||
Sbjct 251 ACCGGAAAGACCATCACCCTGGAAGTTGAGCCCTCCGACACCATCGAGAACGTGAAGGCC 310
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || ||||| || ||| || | | |||||||||||||||
Sbjct 311 AAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAGCAGCGTTTGATCTTCGCCGGAAAG 370
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | ||| || | || |||||| ||||||| ||||| || ||||||
Sbjct 371 CAGCTCGAGGATGGCCGAACTCTGTCGGACTACAACATCCAGAAGGAGTCCACCCTTCAC 430
>seq13746
Length=16180835
Score = 87.8 bits (96), Expect = 4e-12
Identities = 145/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || |||||| | || || ||| || || || |||||
Sbjct 14254233 AAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCGGATACCATCGAAAAT 14254292
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| || |||||| || |||||||||||| || || || | || |||||
Sbjct 14254293 GTCAAAGCCAA-GATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTGATCTT 14254351
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || |||||| |||||||||| | || | | || || ||| | ||||| |||||
Sbjct 14254352 CGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTATAACATTCAGAAGGAGTC 14254411
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
||| | ||| | || || | |||||
Sbjct 14254412 TACCTTGCACTTGGTGCTGCGCCTTCG 14254438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181612611555829
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |