Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq13746 129 5e-25 seq13748 93.3 4e-14 >seq13746 Length=16180835 Score = 129 bits (142), Expect = 5e-25 Identities = 548/845 (65%), Gaps = 27/845 (3%) Strand=Plus/Plus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 ||||| || || || | || || || || || || | || |||||||| || || || Sbjct 14158243 ACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCCGGTTTTA 14158302 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | ||| | |||||| || ||| || |||| | || |||| | || || ||| Sbjct 14158303 AGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTGGCTCTGCC 14158362 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 || | ||| | || ||||||||||| || | | ||||| || |||||||| || Sbjct 14158363 ACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGGCCATTTT- 14158421 Query 136819 AATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877 ||| || ||| || | |||||||| | ||||| | || || || || | || Sbjct 14158422 AATGGTTGATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCGAACCTTTTGGGG 14158481 Query 136878 AATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTT---TCATCATGAGATC 136934 ||| || ||||| || | |||||| || | ||| || | || ||||| ||| Sbjct 14158482 AATGGATTCAATATTTTGAATAGATCCCCTGCTGGAGATTATCTGATTCTTCATGTCATC 14158541 Query 136935 AGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994 ||| | | |||| | ||| || | | ||| || || || ||||| | Sbjct 14158542 -GTCCCACAAATCCAGCTCCGTCA-AGTCCCTCAGCAA-ATGATGGTTAACCACTTGGAA 14158598 Query 136995 TTCGCCCGATAGCAC---TCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTC 137051 || || || || || |||| ||| || | ||| | ||| | |||||||| || || Sbjct 14158599 CTCCCCGGAGAGTACGCGTCTG-GTA--TAAATATTTGTTGTGTAGGGCTCGAAGGACTC 14158655 Query 137052 GTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATT 137111 ||||||||||| |||||| ||||||| ||||| ||||| ||| | ||| | || || Sbjct 14158656 GTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAGTT 14158715 Query 137112 CCGTAAACCGTGTACGGCCAATTGT-TGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCG 137170 | | || || | || | | ||| || |||||||| ||| ||| ||| Sbjct 14158716 TCTGACTCCATGCT-GTTTGATAGACTCCTTCAGAGATTTCCAGTCCCAGAGACCAGTCG 14158774 Query 137171 ATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCAT 137230 | ||| ||| ||||| || |||||| || ||| |||| | || ||| || ||| Sbjct 14158775 ---GCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCAT 14158831 Query 137231 AAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACT--AGTGCGCCATA 137288 ||| ||||| ||||||| || |||||||| ||| || || || || ||| | Sbjct 14158832 AAGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACT--GGCCTCCAGGGCTCCAAA 14158889 Query 137289 GTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCAT 137348 ||| || ||||| | || | | ||||| || || || | ||| |||||||| || Sbjct 14158890 GTAGATTGTTTCAAAAATCTGTTGGTTCAAGAGGCTTGCCTCCTCGCTTTCGTAGGG-AT 14158948 Query 137349 ATCCAATAT-AGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTGTT 137407 | | ||| | | || || || ||||| |||| |||||| |||||||| | || Sbjct 14158949 AACGCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCC 14159008 Query 137408 TAAAATTTGATAT-TTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTATTG 137466 | | ||| || | ||| | | || ||||||||||||| ||||| || ||||| Sbjct 14159009 TCATATTGGACTTCTTGGCCTCCGGCA-GCGGATAAAAGTTGATATCTATTATCTTATTG 14159067 Query 137467 AGATT 137471 || || Sbjct 14159068 AGGTT 14159072 >seq13748 Length=23293914 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/152 (75%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 105763 AAGGGT-TGCACGGCTTTCATGTACACGAATTCGGCGACACGAGCAACGGTTGCACGTCT 105821 |||||| |||||||||| ||||| ||||| ||||| |||| | |||||| |||| ||| Sbjct 5397405 AAGGGTCTGCACGGCTTCCATGTGCACGAGTTCGGAGACAACACCAACGGCTGCATGTCC 5397346 Query 105822 GCCGGCGAGCATTTCAA-CCCTACGGGCATGGCTCACGGCGCGCCCAGCTCTGCCGTTCG 105880 ||||| |||||||| |||||| |||| || |||||||| ||| || || || Sbjct 5397345 TCCGGCCCCCATTTCAACCCCTAC-GGCAAGGAGCACGGCGCTCCCGGCGATGAGAACCG 5397287 Query 105881 TCACGTCGGTGATCTTGGCAATATTGATGCTA 105912 |||| | || || | ||||| || || |||| Sbjct 5397286 TCACTTGGGCGACTTGGGCAACATCGAGGCTA 5397255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445017904963680