Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq13747 145 1e-28
seq13745 114 2e-19
seq13748 87.8 3e-11
>seq13747
Length=19884421
Score = 145 bits (160), Expect = 1e-28
Identities = 331/488 (68%), Gaps = 14/488 (3%)
Strand=Plus/Minus
Query 1455794 AAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTC-C 1455852
|||||| || ||||| || ||||| | ||||||||| |||||| ||| | | || |
Sbjct 8706972 AAAGGCTGAAGCCTCTTTCTGGACTGTCGAGGAGGTGGACCTCT----CGA-AGGATCTC 8706918
Query 1455853 ACTGGGTG---TCGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTT 1455908
|| | || |||| | | |||||||| ||||| |||||| ||||| || |||||
Sbjct 8706917 ACCGATTGGCATCGCCTTAAGGACGACGAACGCCACTTCATCTCCCACGTGCTGGCCTTC 8706858
Query 1455909 TTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGT 1455968
||| || || ||||| || ||| ||||||||||| | ||||| | | |||||
Sbjct 8706857 TTT-GCTGCTTCGGATGGAATTGTGAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGT 8706799
Query 1455969 CCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTC 1456028
|| | | ||||| || | || ||||| ||||| |||||||| |||||| | |||||
Sbjct 8706798 TCAGGTCACGGAGGCGCGCTGTTTCTACGGTTTCCAAATCGCCATGGAAAACGTGCACTC 8706739
Query 1456029 TGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCT 1456088
||| | ||| | || ||||| || ||| | || || | || || ||||
Sbjct 8706738 TGAGATGTACAGTGTGCTCATCGATACTTACATTCGAGATCCCCACCAGCGTGAATACCT 8706679
Query 1456089 CTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTG 1456148
|| ||||| || ||| |||| |||||| | ||||| || ||||| || ||
Sbjct 8706678 GTTCAATGCCATTGAGACGATGCCTGCGGTGAAGCGCAAGGCAGATTGGGCTCTGGCCTG 8706619
Query 1456149 GATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAG 1456207
||| | || | | | | |||||| ||||| || ||| ||||| | ||| |||
Sbjct 8706618 GAT-TTCTTCGAAGTCAGCCA-ACTTTGGGGAGCGCATCATCGCATTTGCTGCCGTGGAG 8706561
Query 1456208 GGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATG 1456267
|| || || ||| ||||| || | | ||||| ||| | |||||||| || | |||
Sbjct 8706560 GGTATATTCTTCAGCGGCAGCTTTGCCTCTATCTTCTGGTTGAAGAAGCGAGGTTTGATG 8706501
Query 1456268 CCCGGTCT 1456275
||||||||
Sbjct 8706500 CCCGGTCT 8706493
>seq13745
Length=6960332
Score = 114 bits (126), Expect = 2e-19
Identities = 204/294 (69%), Gaps = 9/294 (3%)
Strand=Plus/Minus
Query 1817479 AGGGCGTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGG 1817538
|||| |||| || | ||| |||| |||||||||||||||||||| | | ||| ||
Sbjct 509425 AGGGTGTCCTGCACAATGCCCATGACGGGCTTGTTGGCCTGCGGCGTGATGATCTGCCGG 509366
Query 1817539 GCCACGTTCATGGTGTGCGTCACCTCGGCGCGCGCGTCTCA--GACTGGGGCACATGGAG 1817596
| | | | | ||| | |||||||||||||| || || ||||||||||| || ||
Sbjct 509365 GGCGTGATGTGGATGTTCTCCACCTCGGCGCGCGTCTC-CATCGACTGGGGCACGTGCAG 509307
Query 1817597 GTTCATCTCGTCGCCGTCAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACCG 1817656
|||||||||||||||||| || ||||| ||||||| ||| | |||||| | ||
Sbjct 509306 GTTCATCTCGTCGCCGTCGAAATCGGCGTTGTAGGGCGATGTGCACGACAGGTTCATGCG 509247
Query 1817657 CATGGTACGGCCGGGCATGGGCAC---CACCTTGTGCATGAGCATGGAGCCCATGTGGAG 1817713
| ||| | ||||| |||| |||| ||||| | ||| | |||| ||
Sbjct 509246 GAAGGTGGACCAGGGCA---GCACCTTCACCCTGTGCCCCATCATACTCATCTTGTGCAG 509190
Query 1817714 TGAGGGCTGCCGGTTCATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGAC 1817767
| ||||||||||| | | || |||| || ||||||| || ||||| ||
Sbjct 509189 CGTCGGCTGCCGGTTGAAGATGACCAGGTCGTCGTCGCGCAGATGCCGCTCCAC 509136
Score = 107 bits (118), Expect = 3e-17
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 1818069 ATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCACG 1818128
||| | ||||||||||| ||||||| ||||| || ||| | |||| |||||
Sbjct 508996 ATGTTGAAGGGCGTCACCAGCTCGGGGAAGGTCAGATTCTGGGCGATGGAGCGCGGCACA 508937
Query 1818129 CCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTG 1818188
||||||| ||| ||| | | ||| || || | ||||| | || |||| ||||
Sbjct 508936 CCCACCTGGTCGATGCGCAGATTGGGATCCGGAGTAATGACAGTACGGGCGGAGAAGTCC 508877
Query 1818189 ACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCCACG 1818248
|| ||||||||||| | ||||| ||||| | ||||||||||||||| ||||| || |
Sbjct 508876 ACACGCTTGCCCATCAAGTTGCCACGGATGCGGCCCTCCTTGCCCTTCAACCGGGCCTTG 508817
Query 1818249 AGGCCCTTGGTGGGCTTGCCCGAC 1818272
| | |||| |||||||| |||
Sbjct 508816 ATGGCCTTCAGCGGCTTGCCGGAC 508793
>seq13748
Length=23293914
Score = 87.8 bits (96), Expect = 3e-11
Identities = 198/295 (67%), Gaps = 2/295 (1%)
Strand=Plus/Plus
Query 332924 GTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT-CGACCGGAG 332982
||||| ||||||| || || | ||| || ||| | | | |||||||| |||| | |
Sbjct 14555835 GTGTTACAGGCCAAAGCGAATCTCGTGGTGTTGCTGTAGATCTCCATGGTGCGAC-GTAA 14555893
Query 332983 GGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCG 333042
|| || ||||| || ||| | || ||| |||||||| ||||| | |||||||| ||
Sbjct 14555894 CGCTTGCTGGGCGCCCTCCGTCATGCTGTCCGCCTCGTCAAGGATAACAATCTTGTGCCG 14555953
Query 333043 CCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTC 333102
|| |||||| ||| ||| | ||| ||||| | ||||| || || ||
Sbjct 14555954 GCCACGCGGCAATGTCACCTTTTGCTGGGCAAACATCTTGATCTTGTTGCGGACCACATC 14556013
Query 333103 CACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAA 333162
| || || || | || ||||| || ||||| || || || | | | | |||||
Sbjct 14556014 GATTCCTCGTTCATTGGATGCGTTTAGCTCGAGGACAGCTTCCTTGTAGCTGTCTCCCAA 14556073
Query 333163 GAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCC 333217
||| | || ||||| ||| ||| | |||||||||||| ||| || || |||
Sbjct 14556074 GAGTATCCGGGCCAGACACTGAATGGTTGTGGTCTTGCCCACGCCAGGAGGTCCC 14556128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176485083679338
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |