Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq13746 497 1e-135 >seq13746 Length=16180835 Score = 497 bits (550), Expect = 1e-135 Identities = 1246/1869 (67%), Gaps = 42/1869 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 ||||||||||| | || || || ||||| || | |||||||| |||||||| ||| Sbjct 14158246 GTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCCGGTTTTAAGA 14158305 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || |||| ||||||||| || ||| || || ||| |||| || || | | Sbjct 14158306 CCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTGGCTCTGCCACA 14158365 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 || ||||| | || || || ||||| || || || || | ||| || |||||||| || Sbjct 14158366 TGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGGCCATTTTAATG 14158425 Query 68554 ATACTCTTT--TGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCT---G 68608 | || |||| |||||||| | || || ||| | | | | | | | | Sbjct 14158426 GTTGATTTCACTGAG--ATTTCCCATACTGTTTTGTAAA---GGTCGCGAACCTTTTGGG 14158480 Query 68609 GAAGGC--TCG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCAT 68665 ||| | || |||||||||| ||||| | ||| || || |||||| || |||| Sbjct 14158481 GAATGGATTCAATATTTTGAATAGATCCCCTGCTGGAGATTATCTGATTCTTCATGTCAT 14158540 Query 68666 CATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATT 68725 | | |||||| | |||||| || | || || | ||| | ||||| | ||| || | Sbjct 14158541 CGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGGTTAACCACTTGGAACT 14158600 Query 68726 CCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTAT 68785 |||| || | || | | || |||||||| | || || || || | || || || | Sbjct 14158601 CCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGACTCGTTGT 14158660 Query 68786 TTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 68845 | |||| ||| |||||||| ||||| || ||||| || || ||||||| ||||| | Sbjct 14158661 TACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAGTTTCTGA 14158720 Query 68846 GACCATG-TGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACA 68904 ||||| |||| |||| || || ||| |||||| ||||| ||| ||| || Sbjct 14158721 CTCCATGCTGTT-TGATAGACTCCTTCAGAGATTTCCAGTCCCAGAGACCAGTCGGCGTT 14158779 Query 68905 ACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCA 68964 || ||| | ||||| || |||||||| |||||| | ||| | ||| |||||| Sbjct 14158780 TTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATAAGTTTCA 14158839 Query 68965 TAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTT 69024 |||| ||| || | || || ||||| ||||| ||||| | || || | || |||||| Sbjct 14158840 TAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAGATTGTT 14158899 Query 69025 TCGAAAATCTTCTTATTGA-GAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAAA 69082 || ||||||| | || | || |||| || || | || ||| | |||||| | | || Sbjct 14158900 TCAAAAATCTGTTGGTTCAAGAGGCTTGC-CTCCTCG-CTTTCGTAGGGATAACGCATAA 14158957 Query 69083 GAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTG 69142 |||| | || || |||| ||||||||| || || |||||||| | ||| ||| |||| | Sbjct 14158958 GAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCATATTGG 14159017 Query 69143 AACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGA 69202 | | | || || || | |||||| | || |||||||| || ||||| || |||| | Sbjct 14159018 ACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGTTTCTGG 14159077 Query 69203 CTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA-----TAAC 69257 | || || || |||||||| || || ||| || ||| ||| | || Sbjct 14159078 CCACCGTCTTTGTGACCTCCTTTAGCTTTTTGAAGTCATAT-GTCT-TCTCGGGAGTCAC 14159135 Query 69258 AAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATA 69317 |||||| || || || | || || | ||| |||||||| | ||| | || | ||| Sbjct 14159136 AAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAAGAATA 14159195 Query 69318 TTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACT 69377 | | || || || || ||||| || || || || || |||| ||| || || || || Sbjct 14159196 CTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGGTTGCT 14159255 Query 69378 CTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTC 69437 |||| ||| |||||||||||| | || || | ||| | ||||| || | || || || Sbjct 14159256 CTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGCGACTC 14159315 Query 69438 GATAATAGATTTCCA-AACGACCCTAGCATT--TATTACGGTCTTGTAACGCTTCTCTTT 69494 || |||| ||| || ||| | || || | | || ||| || ||| | Sbjct 14159316 AATGATAGCAAACCACAAGGACTGT-GCTTTCACAGTTCG--ATTGGCGCGTCCCTCCTG 14159372 Query 69495 TTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACA 69554 ||| |||| ||| || ||| || ||||| ||||| ||||||| | ||||| || Sbjct 14159373 TTCGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAGGGCA 14159432 Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614 || || |||||||| || ||||| | |||| ||| ||||||||||| || ||||| Sbjct 14159433 TTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGAGATC 14159492 Query 69615 GGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttt 69673 || ||||| || || ||| || | ||| | || || || ||||| || || ||||| | Sbjct 14159493 TGGTATCCACAGGGC-ATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTATTCT 14159551 Query 69674 ttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGA 69733 | ||||| || |||||||| | | ||| |||||||| || || ||||| || || | | Sbjct 14159552 TCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAAAGG 14159611 Query 69734 CTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCA 69793 ||||||| || || || |||||||| | || | || ||| ||| ||||||||| Sbjct 14159612 CTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTCTCA 14159671 Query 69794 GCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGC 69853 |||| |||| | ||||| ||| | ||||| ||||| |||| | | || |||| | Sbjct 14159672 GCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTTTGCAC 14159731 Query 69854 GAATATTACTAATAGA----TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAA 69909 |||| ||| || ||||| || || || || || ||||| | || || Sbjct 14159732 GAAT----GCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGGCGCAT 14159787 Query 69910 CGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAG 69969 | | | | | | |||||||| ||| || | ||||| | || || |||||| Sbjct 14159788 TGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAAACAG 14159847 Query 69970 CTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAAC 70029 |||| || || | | || | || ||| | ||| || || ||||||||||| Sbjct 14159848 GACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGAGTGAAA 14159907 Query 70030 CATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATT 70089 | || || |||| ||||| || || | || | || || || ||||||| Sbjct 14159908 TAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCATGAATT 14159967 Query 70090 CCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTC 70149 || || || || ||||| | ||| || || || || || | ||| ||||||||| Sbjct 14159968 CCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTCGGCGACTTTTCCATTTATTTTA 14160027 Query 70150 AACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCG 70209 | ||||| || |||||||||||||||||||| || || || |||||| | || Sbjct 14160028 AGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTAATTATAACCAAAGTCACGATCA 14160087 Query 70210 TAAATAATA 70218 ||||| ||| Sbjct 14160088 TAAATTATA 14160096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686790746136360