Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 122 7e-23
seq13747 113 4e-20
>seq13746
Length=16180835
Score = 122 bits (134), Expect = 7e-23
Identities = 316/479 (66%), Gaps = 16/479 (3%)
Strand=Plus/Minus
Query 40947 AAAGGAATGGATCAATTACAGTGCGTTATAGATACGATTAA-----ATCCGATCCCGATA 41001
|| || || |||||| || || || || || ||||| || |||| | | ||||
Sbjct 795952 AAGGGTATCGATCAACTAAAGCATGTCATTGACACGATAAAGAAGAATCC--TTCGGATA 795895
Query 41002 GCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCAC 41061
| ||| || || ||| |||||||| || |||| | | ||||||||||| |
Sbjct 795894 G---ACGGATCATCATGTCGGCGTGGAATCCTCTGGACATTCCAAAAATGGCATTGCCTC 795838
Query 41062 CTTGTCATTTGTTATGTCAGTTTTACGT-TTGCA-----ATGGTGAACTGTCATGTCAAT 41115
| || || | || ||||||||| || | || || ||||| || || ||
Sbjct 795837 CGTGCCACTGCTTGGCTCAGTTTTATGTCTCTCAGGAGCGCGGCGAACTCTCCTGCCAGC 795778
Query 41116 TGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTC 41175
|||||||| || | |||||||| || || || || || ||||| || |||||
Sbjct 795777 TGTATCAACGAAGCGCCGACATGGGCCTGGGTGTACCCTTCAACATTGCCTCCTATGCCT 795718
Query 41176 TGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGT 41235
|| | || |||||||| || || || || | |||| |||||||| || || |||||
Sbjct 795717 TGTTGACCTATATGATCGCCCATGTCACTGGTCTAAAGCCTGGTGACTTCGTACACACTA 795658
Query 41236 TAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAA 41295
| ||||| ||| | ||| | |||||| | ||||| | || ||||| |||
Sbjct 795657 TGGGAGACACGCATGTATACCTAAATCACGTGGAGCCACTTCAGGAGCAACTTGAACGCG 795598
Query 41296 AACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAACATTGATGATTTTT 41355
| || | || || || | ||| ||||||| ||| || | ||||||| ||||||
Sbjct 795597 AGCCGCGGCCCTTCCCCAAACTAGTTATTAAGCGCCAGGTGCAGGACATTGAAGATTTTC 795538
Query 41356 GCATCGATGATTTTGTCGTTTGCGATTACAATCCGTACCCTAAAATCCACATGGACATG 41414
|| ||| || |||| || ||||||||| || || || || || | |||||||||
Sbjct 795537 GCTACGAGGACTTTGAAATTGTCGATTACAACCCCTATCCAAAGATAAAGATGGACATG 795479
>seq13747
Length=19884421
Score = 113 bits (124), Expect = 4e-20
Identities = 475/740 (64%), Gaps = 20/740 (3%)
Strand=Plus/Minus
Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913
|||| || |||||||| || || || || || || || |||| || || |
Sbjct 8706865 TGGCCTTCTTTGCTGCTTCGGATGGAATTGTGAACGAGAACCTGGTGGAGCGCTTCAGTC 8706806
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
| || ||||| | | || || || ||||| || || || ||||| ||||| |||||
Sbjct 8706805 AGGAGGTTCAGGTCACGGAGGCGCGCTGTTTCTACGGTTTCCAAATCGCCATGGAAAACG 8706746
Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033
| || || || ||||||||| | || || ||||| ||||| |||| ||| || |
Sbjct 8706745 TGCACTCTGAGATGTACAGTGTGCTCATCGATACTTACATTCGAGATCCCCACCAG---C 8706689
Query 44034 ATCGAT---TGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGG 44090
| || |||| ||||| || || || | |||||| | || | || ||||| ||||
Sbjct 8706688 GTGAATACCTGTTCAATGCCATTGAGACGATGCCTGCGGTGAAGCGCAAGGCAGATTGGG 8706629
Query 44091 CCCTTAAATGGATAAATTCAAA-TGATTCT--TTTGGAGAACGACTTGTCGCGTTTGCAG 44147
| || ||||| ||| || | | | ||||| || || | |||| ||||| |
Sbjct 8706628 CTCTGGCCTGGATTTCTTCGAAGTCAGCCAACTTTGGGGAGCGCATCATCGCATTTGCTG 8706569
Query 44148 TTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAG 44207
||||| || || ||||| || ||||| | || || ||||| ||||| ||||
Sbjct 8706568 CCGTGGAGGGTATATTCTTCAGCGGCAGCTTTGCCTCTATCTTCTGGTTGAAGAAGCGAG 8706509
Query 44208 GTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATT 44267
|||||||||| || |||| || || || ||| | || | || ||||| | || |
Sbjct 8706508 GTTTGATGCCCGGTCTGACCTTCTCCAACGAGCTTATCTCCAGGGACGAAGGTCTGCACT 8706449
Query 44268 GCGATTTTGCT-TGCTTGT-TACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGAC 44325
|||| || ||| ||||| | | | | | || | | | || || | ||
Sbjct 8706448 GCGACTTCGCTGTGCTTATGTTCCAGCACCTC-----GTCCAGAAACCACGTCGCGAGCG 8706394
Query 44326 AATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATT 44385
|| | || ||| | || || || | || || || || || | || || ||
Sbjct 8706393 CATCATCGAGATTATCCGCGATGCTGTGGACATTGAGCAGGAGTTCCTCACCGACGCCTT 8706334
Query 44386 ACCTGTAAATTTAATAGGAATGAA-TG-AACTTTTGATGAACCAATATATTGAATACATT 44443
|| || ||||| || || ||||| || || |||||| ||||| || |||| |
Sbjct 8706333 GCCCGTGAATTTGATCGGCATGAACTGCGAC--TTGATGTCGCAATACATCGAATTTGTG 8706276
Query 44444 GCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTT 44503
|| || || |||| | || ||||| | ||| ||| | ||||||| ||
Sbjct 8706275 GCGGACCGGCTACTGGTAGAGCTGGGCGTAGGCAAAATCTACAACACCAAAAACCCTTTC 8706216
Query 44504 GATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGA 44563
|||| ||||| | || ||| |||| || || || ||||| |||||||| || |||
Sbjct 8706215 AATTTCATGGAGATGATCTCGCTGGACGGGAAGACCAACTTCTTTGAAAAGAAGGTGGGA 8706156
Query 44564 GAATATCAGCGAATGGGCGT 44583
|| || ||||| ||||||||
Sbjct 8706155 GAGTACCAGCGTATGGGCGT 8706136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397389399912745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |