Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 167 3e-36
>seq13746
Length=16180835
Score = 167 bits (184), Expect = 3e-36
Identities = 883/1387 (64%), Gaps = 36/1387 (3%)
Strand=Plus/Plus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
|| || ||||||||||| || || ||| | || || ||||||| || || || || ||
Sbjct 14158624 TAAATATTTGTTGTGTAGGGCTCGAAGGACTCGTTGTTACCCATAATCTGAGCAGTCGAT 14158683
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827
||||| ||||| || || | ||| || ||| | | || | || ||||| |||
Sbjct 14158684 GCTGTGGGCATCGGAGCAACCAATAGGGAGTTTCTGACTCCATGCTGTTTGATAGACTCC 14158743
Query 110828 TTGAGAACATCCCAGTCGTAGTTGAGC--TTGG--TTTCACCTTCCCACATGTCAAACTG 110883
|| ||| | |||||| || || | | || ||| | ||||||||||| ||||
Sbjct 14158744 TTCAGAGATTTCCAGTCCCAGA-GACCAGTCGGCGTTTTA---TCCCACATGTCGTACTG 14158799
Query 110884 AAGCAC-CCCTTGGGACG--CGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940
|| | ||||| || | || || ||| | |||||||| | || | ||
Sbjct 14158800 CAGAATTCCCTT---ACTTACTGGGCTTCCTTCATAAGTTTCATAAGTTCCGTCTTTTTG 14158856
Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000
|||| ||| || || |||||||||| | | || || |||||||| || | ||
Sbjct 14158857 GGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAGATTGTTTCAAAAATCTGTTGGTT 14158916
Query 111001 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGA 111059
|| | || || || || | | || || || || ||| | | || || |
Sbjct 14158917 CAAGAGGCTTGCCTCCTCGCTTTCGTAGGGATAACG-CATAAGAATCAGCGCGTCAGCCA 14158975
Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAA 111119
| || |||||||| | || ||||| | || | |||||| ||||| || | |
Sbjct 14158976 GTCCCTGAACACCGATTCCGATAGGACGATGCCTCATATTGGACTTCTTGGCCTCCGGCA 14159035
Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179
|||||||| || | || || | || || ||| ||| || ||||||||| |
Sbjct 14159036 GCGGATAAAAGTTGATATCTATTATCTTATTGAGGTTTCTGGCCACCGTCTTTGTGACCT 14159095
Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239
| | || |||| | ||| | || |||| | | ||| || | || ||||
Sbjct 14159096 CCTTTAGCTTTTTGAAGTCATATGTCT---TCTCGGGAGTCACAAACATGTTGAGAGCGA 14159152
Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299
| || |||||||||||||| || |||| || | ||||| | |||||| || |
Sbjct 14159153 TGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAAGAATACTCAACAATTTCCGTGC 14159212
Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359
| | ||| | |||||| || |||| ||||| |||||| ||||| |||||| || |
Sbjct 14159213 ACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGT 14159272
Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-A 111418
||||| | |||||||| || | || |||||| || || | | ||||| ||| |
Sbjct 14159273 CCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAACCACA 14159332
Query 111419 ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478
| | | ||| ||| | ||||| ||||||||| ||||| || |||||
Sbjct 14159333 AGGACTG-TGCTTTCACAGTTCGATTGGCGCGTCCCTCCTGTTCGTATTTCACATAGAGT 14159391
Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538
||||||||| || ||| | | || ||| || || || | ||||| | |
Sbjct 14159392 TTTTCAAACTCATCGCCCCACACATCATGGAGGCCAGGGCATTTATGGGGACACATTAAC 14159451
Query 111539 GACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596
||||| | || | || |||| || || |||||||| || ||||| ||||||||||
Sbjct 14159452 GACCA--GTCCTCATTGGCCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAGGGCAT 14159509
Query 111597 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAAC 111655
| || | ||| | ||| |||||| | || | | || ||| || || |||
Sbjct 14159510 AGAACAAATCGCGGGCTCGATGCTCTTCCTTGCC-AGTATTCTTCTTAAGGTCCAGAAAC 14159568
Query 111656 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGC 111712
|| | | ||||| ||||| ||||| ||||| | || | | |||| || |
Sbjct 14159569 TCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGCCA 14159628
Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772
||| | |||| ||||| ||||| | |||||| || | ||||| |||| | |||
Sbjct 14159629 CCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGCCA 14159688
Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATGTG 111831
| ||| ||||| || || | ||| |||| | || || | | ||||| ||
Sbjct 14159689 TTGGATGTGCCATTCGTTCCGCAAAT-CGAGGTACCCTTTGCACGAATGCAATGGACGTT 14159747
Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 111891
| |||||||| ||||| |||| ||||| || || | | || | | ||||
Sbjct 14159748 AAGACCAATACCACCAGCAGACTTGGAGATCATGGCGCATTGCTCAACCGATTTGAAGAT 14159807
Query 111892 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC--TT 111949
||| | ||| ||||| | | ||| | ||||| || |||| ||| || | ||
Sbjct 14159808 ACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAAACAGGACGACAGCTGGGGACGATT 14159867
Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTG 112009
||| |||| || || ||||| | |||||| |||| || | ||||| | |
Sbjct 14159868 CGTG--GCAGCGGCAAAAAGTGTTGGCGAAGCGTGAGTGAAATAACGCTCGGACAGCAAG 14159925
Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069
| ||| ||||||| | ||| ||| |||||||| || || || |||||||| || |||||
Sbjct 14159926 TTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCATGAATTCCGATTGCCACGCGCATA 14159985
Query 112070 AACATGT 112076
| |||||
Sbjct 14159986 AGCATGT 14159992
Score = 107 bits (118), Expect = 2e-18
Identities = 183/263 (70%), Gaps = 2/263 (1%)
Strand=Plus/Minus
Query 181806 TCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTG 181865
|| || || ||| | | || ||||| || ||||| | ||||| || || |||||||||
Sbjct 12128590 TCCTTGCCGCCCGTCAACCGAGTACCGAACTGACCTCGGGGCTCCAGCAGATTAATGTTG 12128531
Query 181866 TTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACACTTCACC 181924
|| || || ||||| | |||||| || |||||||| ||| || || ||||| || ||
Sbjct 12128530 TTCGAGCCGACATAGTTCTGGGCCAAGTTTACGATGGTCATCTGC-AGTGACACCTCGCC 12128472
Query 181925 GTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATC 181984
||| ||||| || ||| | || || || | | | |||||| || ||||||| |||
Sbjct 12128471 GTGATGGTAGGCCGACATCTCGGCCACTGAACCGGACAACTGGGCTACCTTCACTTCGCG 12128412
Query 181985 TTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044
|| ||| | | |||||| | |||| || || | ||| ||||| | |||||
Sbjct 12128411 CTTATCGTTTCTCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTCAAGCCATC 12128352
Query 182045 CGCCATATGGGCAATAGAGCGCT 182067
| ||| | || ||| |||||||
Sbjct 12128351 CACCAGACTGGGAATGGAGCGCT 12128329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627924064850400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |