Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq13746 167 3e-36 >seq13746 Length=16180835 Score = 167 bits (184), Expect = 3e-36 Identities = 883/1387 (64%), Gaps = 36/1387 (3%) Strand=Plus/Plus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 || || ||||||||||| || || ||| | || || ||||||| || || || || || Sbjct 14158624 TAAATATTTGTTGTGTAGGGCTCGAAGGACTCGTTGTTACCCATAATCTGAGCAGTCGAT 14158683 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827 ||||| ||||| || || | ||| || ||| | | || | || ||||| ||| Sbjct 14158684 GCTGTGGGCATCGGAGCAACCAATAGGGAGTTTCTGACTCCATGCTGTTTGATAGACTCC 14158743 Query 110828 TTGAGAACATCCCAGTCGTAGTTGAGC--TTGG--TTTCACCTTCCCACATGTCAAACTG 110883 || ||| | |||||| || || | | || ||| | ||||||||||| |||| Sbjct 14158744 TTCAGAGATTTCCAGTCCCAGA-GACCAGTCGGCGTTTTA---TCCCACATGTCGTACTG 14158799 Query 110884 AAGCAC-CCCTTGGGACG--CGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940 || | ||||| || | || || ||| | |||||||| | || | || Sbjct 14158800 CAGAATTCCCTT---ACTTACTGGGCTTCCTTCATAAGTTTCATAAGTTCCGTCTTTTTG 14158856 Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 |||| ||| || || |||||||||| | | || || |||||||| || | || Sbjct 14158857 GGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAGATTGTTTCAAAAATCTGTTGGTT 14158916 Query 111001 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGA 111059 || | || || || || | | || || || || ||| | | || || | Sbjct 14158917 CAAGAGGCTTGCCTCCTCGCTTTCGTAGGGATAACG-CATAAGAATCAGCGCGTCAGCCA 14158975 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAA 111119 | || |||||||| | || ||||| | || | |||||| ||||| || | | Sbjct 14158976 GTCCCTGAACACCGATTCCGATAGGACGATGCCTCATATTGGACTTCTTGGCCTCCGGCA 14159035 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 |||||||| || | || || | || || ||| ||| || ||||||||| | Sbjct 14159036 GCGGATAAAAGTTGATATCTATTATCTTATTGAGGTTTCTGGCCACCGTCTTTGTGACCT 14159095 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239 | | || |||| | ||| | || |||| | | ||| || | || |||| Sbjct 14159096 CCTTTAGCTTTTTGAAGTCATATGTCT---TCTCGGGAGTCACAAACATGTTGAGAGCGA 14159152 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299 | || |||||||||||||| || |||| || | ||||| | |||||| || | Sbjct 14159153 TGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAAGAATACTCAACAATTTCCGTGC 14159212 Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359 | | ||| | |||||| || |||| ||||| |||||| ||||| |||||| || | Sbjct 14159213 ACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGT 14159272 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-A 111418 ||||| | |||||||| || | || |||||| || || | | ||||| ||| | Sbjct 14159273 CCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAACCACA 14159332 Query 111419 ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478 | | | ||| ||| | ||||| ||||||||| ||||| || ||||| Sbjct 14159333 AGGACTG-TGCTTTCACAGTTCGATTGGCGCGTCCCTCCTGTTCGTATTTCACATAGAGT 14159391 Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 ||||||||| || ||| | | || ||| || || || | ||||| | | Sbjct 14159392 TTTTCAAACTCATCGCCCCACACATCATGGAGGCCAGGGCATTTATGGGGACACATTAAC 14159451 Query 111539 GACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596 ||||| | || | || |||| || || |||||||| || ||||| |||||||||| Sbjct 14159452 GACCA--GTCCTCATTGGCCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAGGGCAT 14159509 Query 111597 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAAC 111655 | || | ||| | ||| |||||| | || | | || ||| || || ||| Sbjct 14159510 AGAACAAATCGCGGGCTCGATGCTCTTCCTTGCC-AGTATTCTTCTTAAGGTCCAGAAAC 14159568 Query 111656 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGC 111712 || | | ||||| ||||| ||||| ||||| | || | | |||| || | Sbjct 14159569 TCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGCCA 14159628 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | |||| ||||| ||||| | |||||| || | ||||| |||| | ||| Sbjct 14159629 CCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGCCA 14159688 Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATGTG 111831 | ||| ||||| || || | ||| |||| | || || | | ||||| || Sbjct 14159689 TTGGATGTGCCATTCGTTCCGCAAAT-CGAGGTACCCTTTGCACGAATGCAATGGACGTT 14159747 Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 111891 | |||||||| ||||| |||| ||||| || || | | || | | |||| Sbjct 14159748 AAGACCAATACCACCAGCAGACTTGGAGATCATGGCGCATTGCTCAACCGATTTGAAGAT 14159807 Query 111892 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC--TT 111949 ||| | ||| ||||| | | ||| | ||||| || |||| ||| || | || Sbjct 14159808 ACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAAACAGGACGACAGCTGGGGACGATT 14159867 Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTG 112009 ||| |||| || || ||||| | |||||| |||| || | ||||| | | Sbjct 14159868 CGTG--GCAGCGGCAAAAAGTGTTGGCGAAGCGTGAGTGAAATAACGCTCGGACAGCAAG 14159925 Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069 | ||| ||||||| | ||| ||| |||||||| || || || |||||||| || ||||| Sbjct 14159926 TTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCATGAATTCCGATTGCCACGCGCATA 14159985 Query 112070 AACATGT 112076 | ||||| Sbjct 14159986 AGCATGT 14159992 Score = 107 bits (118), Expect = 2e-18 Identities = 183/263 (70%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 181806 TCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTG 181865 || || || ||| | | || ||||| || ||||| | ||||| || || ||||||||| Sbjct 12128590 TCCTTGCCGCCCGTCAACCGAGTACCGAACTGACCTCGGGGCTCCAGCAGATTAATGTTG 12128531 Query 181866 TTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACACTTCACC 181924 || || || ||||| | |||||| || |||||||| ||| || || ||||| || || Sbjct 12128530 TTCGAGCCGACATAGTTCTGGGCCAAGTTTACGATGGTCATCTGC-AGTGACACCTCGCC 12128472 Query 181925 GTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATC 181984 ||| ||||| || ||| | || || || | | | |||||| || ||||||| ||| Sbjct 12128471 GTGATGGTAGGCCGACATCTCGGCCACTGAACCGGACAACTGGGCTACCTTCACTTCGCG 12128412 Query 181985 TTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044 || ||| | | |||||| | |||| || || | ||| ||||| | ||||| Sbjct 12128411 CTTATCGTTTCTCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTCAAGCCATC 12128352 Query 182045 CGCCATATGGGCAATAGAGCGCT 182067 | ||| | || ||| ||||||| Sbjct 12128351 CACCAGACTGGGAATGGAGCGCT 12128329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627924064850400