Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq13746 212 8e-50 seq13747 141 1e-28 >seq13746 Length=16180835 Score = 212 bits (234), Expect = 8e-50 Identities = 907/1415 (64%), Gaps = 24/1415 (2%) Strand=Plus/Plus Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 ||||| || | ||| |||||| ||| ||||| || ||||| ||||| ||| |||| Sbjct 14158597 AACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGACTCG 14158656 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 |||||||||| || || || || || ||||||||||| || || | | ||| ||| Sbjct 14158657 TTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAGTTT 14158716 Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT-GT 118333 | || || | | | || ||||| |||| | |||||| || || | | | Sbjct 14158717 CTGACTCCATGCTGTTTGATAGACTCCTTCAGAGATTTCCAGTCCCAGA-GACCAGTCGG 14158775 Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393 | | |||||| || |||| || || || | |||| ||| ||| | || Sbjct 14158776 CGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATAAGT 14158835 Query 118394 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453 ||||| | || || | |||| |||| | || ||||| |||||| | || || Sbjct 14158836 TTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAGAT 14158895 Query 118454 TGTTTCAAAAATGCGAGCATTCATT-GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 118512 |||||||||||| | |||| | |||| |||| ||| || | | || || Sbjct 14158896 TGTTTCAAAAATCTGTTGGTTCAAGAGGCTTG-CCTCCTCGCTTTCGTAGG-GATAACGC 14158953 Query 118513 ACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 118571 | || ||| | | || || || || || ||||||| || || || ||||| |||||| Sbjct 14158954 ATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCATA 14159013 Query 118572 TTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 118631 || |||||| || | || |||||||| || |||| || | | |||| || ||| Sbjct 14159014 TTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGTTT 14159073 Query 118632 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 118691 ||| || |||||||| || | ||||||| | | ||| | | |||| | Sbjct 14159074 CTGGCCACCGTCTTTGTGACCTCCTTTAGCTTTTTGAAGTCATATGTCT---TCTCGGGA 14159130 Query 118692 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 118751 | ||| || | || ||||| || |||| ||| || || | |||| || | Sbjct 14159131 GTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAA 14159190 Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811 | ||||| | |||||||||||||| || | |||||||||||||| |||| ||| Sbjct 14159191 GAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGG 14159250 Query 118812 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 118871 || |||| ||| || || |||||| | |||||||| || | || |||||| ||| Sbjct 14159251 TTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGC 14159310 Query 118872 GACTTGAGAATAGCCTTCCAGACATCGGCAG--CTGGCACAGTGGCGTTGGCTCGCCCCT 118929 |||| | ||||| ||| || | | | || |||||| ||||| || |||| Sbjct 14159311 GACTCAATGATAGCAAACCA--CAAGGACTGTGCTTTCACAGTTCGATTGGCGCGTCCCT 14159368 Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989 | | ||||| || ||||| ||||||||| || ||| | || ||| || | Sbjct 14159369 CCTGTTCGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAG 14159428 Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049 | |||| || || | | ||||| | || |||| || || |||||||||| Sbjct 14159429 GGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGA 14159488 Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109 | ||||| ||||| || || |||| | ||| || ||| ||||| | || || Sbjct 14159489 GATCTGGTATCCACAGGGCATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTAT 14159548 Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169 | | |||| ||| || | | ||||| ||||| || ||||| || | || | Sbjct 14159549 TCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAA 14159608 Query 119170 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226 | ||| || | |||| |||| | ||||||| ||| | |||||| || | Sbjct 14159609 AGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTC 14159668 Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAG--ACTTATT 119284 ||||| |||| | |||| |||| |||||| || || | ||| |||| || || Sbjct 14159669 TCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAAT-CGAGGTAC-CCTT 14159726 Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344 || | | |||| || | ||||||||| || || |||| ||||| ||||| Sbjct 14159727 TGCACGAATGCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGGCGCA 14159786 Query 119345 CTCCGTGAGACTG--CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402 | | | | || | | |||| || ||||| ||||| | | | | | |||||| Sbjct 14159787 TTGC-TCA-ACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAAA 14159844 Query 119403 CAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462 ||| ||||| || || | || ||||| || || ||||| | ||||| || Sbjct 14159845 CAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGAGTG 14159904 Query 119463 AACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGA 119522 || || | ||||| | || ||| ||||||| | | || |||||||| || ||| Sbjct 14159905 AAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCATGA 14159964 Query 119523 ATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 || ||||| | || ||||||| ||||| |||||| Sbjct 14159965 ATTCCGATTGCCACGCGCATAAGCATGTGTTGGGG 14159999 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123 ||| ||||| ||| | | || || || || ||||| | ||||| || ||||| || || Sbjct 12128591 ATCCTTGCCGCCCGTCAACCGAGTACCGAACTGACCTCGGGGCTCCAGCAGATTAATGTT 12128532 Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 179182 ||| || || | |||| | |||||| || || || || ||| || || || || || | Sbjct 12128531 GTTCGAGCCGACATAGTTCTGGGCCAAGTTTACGATGGTCATCTGC-AGTGACACCTCGC 12128473 Query 179183 CGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCAT 179242 |||||||||| |||||| | || ||||| | | | |||||| || ||||||| || Sbjct 12128472 CGTGATGGTAGGCCGACATCTCGGCCACTGAACCGGACAACTGGGCTACCTTCACTTCGC 12128413 Query 179243 CCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTT 179279 ||| ||| | | |||||| | |||| ||||| Sbjct 12128412 GCTTATCGTTTCTCTTGAAGCAGGTGAACATGACCTT 12128376 >seq13747 Length=19884421 Score = 141 bits (156), Expect = 1e-28 Identities = 306/450 (68%), Gaps = 6/450 (1%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || ||| ||| || |||||||| ||||||||||||| ||| ||||||| Sbjct 8706151 TACTCTCCCACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTCCATG 8706210 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGC-ACTCCAATCTGTTTGAGGAGACG 129846 |||| || ||||| || | ||| | ||| || | || || | || | || || || Sbjct 8706211 AAATTGAAAGGGTTTTTGGTGTTGTAGATT-TTGCCTACGCCCAGCTCTACCAGTAGCCG 8706269 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 |||| || | || ||||| | |||||| ||| ||||||| ||||| | || || Sbjct 8706270 GTCCGCCACAAATTCGATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAATT-CA 8706328 Query 129907 TGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 ||| | ||||| || |||| ||| ||||||||||||||| || || | || || Sbjct 8706329 CGGGCAAGGCGTCGGTGAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAATCTCGA 8706388 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCC 130024 ||| || || | | | | || | | || || ||| | ||| || || || Sbjct 8706389 TGATGCGCT-CGCGACGTGGTTTCTGGACGAGGTGCTGGAACATAAGCACAGCGAAGTCG 8706447 Query 130025 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 130084 ||| ||||| ||||| | |||||| || || || |||||| |||||| ||||| | | Sbjct 8706448 CAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCGGGCATCAAA 8706507 Query 130085 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144 || ||||||||||||||||| || | ||| ||| |||||| || |||||||| Sbjct 8706508 CCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATACCCTCCACG 8706567 Query 130145 CACGCGAACGCAAAGAGACGCTCAGCAAAG 130174 || || || | || ||||| ||||| Sbjct 8706568 GCAGCAAATGCGATGATGCGCTCCCCAAAG 8706597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618328914180440