Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 212 8e-50
seq13747 141 1e-28
>seq13746
Length=16180835
Score = 212 bits (234), Expect = 8e-50
Identities = 907/1415 (64%), Gaps = 24/1415 (2%)
Strand=Plus/Plus
Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214
||||| || | ||| |||||| ||| ||||| || ||||| ||||| ||| ||||
Sbjct 14158597 AACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGACTCG 14158656
Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274
|||||||||| || || || || || ||||||||||| || || | | ||| |||
Sbjct 14158657 TTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAGTTT 14158716
Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT-GT 118333
| || || | | | || ||||| |||| | |||||| || || | | |
Sbjct 14158717 CTGACTCCATGCTGTTTGATAGACTCCTTCAGAGATTTCCAGTCCCAGA-GACCAGTCGG 14158775
Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393
| | |||||| || |||| || || || | |||| ||| ||| | ||
Sbjct 14158776 CGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATAAGT 14158835
Query 118394 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453
||||| | || || | |||| |||| | || ||||| |||||| | || ||
Sbjct 14158836 TTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAGAT 14158895
Query 118454 TGTTTCAAAAATGCGAGCATTCATT-GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 118512
|||||||||||| | |||| | |||| |||| ||| || | | || ||
Sbjct 14158896 TGTTTCAAAAATCTGTTGGTTCAAGAGGCTTG-CCTCCTCGCTTTCGTAGG-GATAACGC 14158953
Query 118513 ACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 118571
| || ||| | | || || || || || ||||||| || || || ||||| ||||||
Sbjct 14158954 ATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCATA 14159013
Query 118572 TTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 118631
|| |||||| || | || |||||||| || |||| || | | |||| || |||
Sbjct 14159014 TTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGTTT 14159073
Query 118632 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 118691
||| || |||||||| || | ||||||| | | ||| | | |||| |
Sbjct 14159074 CTGGCCACCGTCTTTGTGACCTCCTTTAGCTTTTTGAAGTCATATGTCT---TCTCGGGA 14159130
Query 118692 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 118751
| ||| || | || ||||| || |||| ||| || || | |||| || |
Sbjct 14159131 GTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAA 14159190
Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811
| ||||| | |||||||||||||| || | |||||||||||||| |||| |||
Sbjct 14159191 GAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGG 14159250
Query 118812 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 118871
|| |||| ||| || || |||||| | |||||||| || | || |||||| |||
Sbjct 14159251 TTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGC 14159310
Query 118872 GACTTGAGAATAGCCTTCCAGACATCGGCAG--CTGGCACAGTGGCGTTGGCTCGCCCCT 118929
|||| | ||||| ||| || | | | || |||||| ||||| || ||||
Sbjct 14159311 GACTCAATGATAGCAAACCA--CAAGGACTGTGCTTTCACAGTTCGATTGGCGCGTCCCT 14159368
Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989
| | ||||| || ||||| ||||||||| || ||| | || ||| || |
Sbjct 14159369 CCTGTTCGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAG 14159428
Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049
| |||| || || | | ||||| | || |||| || || ||||||||||
Sbjct 14159429 GGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGA 14159488
Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109
| ||||| ||||| || || |||| | ||| || ||| ||||| | || ||
Sbjct 14159489 GATCTGGTATCCACAGGGCATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTAT 14159548
Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169
| | |||| ||| || | | ||||| ||||| || ||||| || | || |
Sbjct 14159549 TCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAA 14159608
Query 119170 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226
| ||| || | |||| |||| | ||||||| ||| | |||||| || |
Sbjct 14159609 AGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTC 14159668
Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAG--ACTTATT 119284
||||| |||| | |||| |||| |||||| || || | ||| |||| || ||
Sbjct 14159669 TCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAAT-CGAGGTAC-CCTT 14159726
Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344
|| | | |||| || | ||||||||| || || |||| ||||| |||||
Sbjct 14159727 TGCACGAATGCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGGCGCA 14159786
Query 119345 CTCCGTGAGACTG--CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402
| | | | || | | |||| || ||||| ||||| | | | | | ||||||
Sbjct 14159787 TTGC-TCA-ACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAAA 14159844
Query 119403 CAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462
||| ||||| || || | || ||||| || || ||||| | ||||| ||
Sbjct 14159845 CAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGAGTG 14159904
Query 119463 AACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGA 119522
|| || | ||||| | || ||| ||||||| | | || |||||||| || |||
Sbjct 14159905 AAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCATGA 14159964
Query 119523 ATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557
|| ||||| | || ||||||| ||||| ||||||
Sbjct 14159965 ATTCCGATTGCCACGCGCATAAGCATGTGTTGGGG 14159999
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123
||| ||||| ||| | | || || || || ||||| | ||||| || ||||| || ||
Sbjct 12128591 ATCCTTGCCGCCCGTCAACCGAGTACCGAACTGACCTCGGGGCTCCAGCAGATTAATGTT 12128532
Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 179182
||| || || | |||| | |||||| || || || || ||| || || || || || |
Sbjct 12128531 GTTCGAGCCGACATAGTTCTGGGCCAAGTTTACGATGGTCATCTGC-AGTGACACCTCGC 12128473
Query 179183 CGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCAT 179242
|||||||||| |||||| | || ||||| | | | |||||| || ||||||| ||
Sbjct 12128472 CGTGATGGTAGGCCGACATCTCGGCCACTGAACCGGACAACTGGGCTACCTTCACTTCGC 12128413
Query 179243 CCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTT 179279
||| ||| | | |||||| | |||| |||||
Sbjct 12128412 GCTTATCGTTTCTCTTGAAGCAGGTGAACATGACCTT 12128376
>seq13747
Length=19884421
Score = 141 bits (156), Expect = 1e-28
Identities = 306/450 (68%), Gaps = 6/450 (1%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || || ||| ||| || |||||||| ||||||||||||| ||| |||||||
Sbjct 8706151 TACTCTCCCACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTCCATG 8706210
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGC-ACTCCAATCTGTTTGAGGAGACG 129846
|||| || ||||| || | ||| | ||| || | || || | || | || || ||
Sbjct 8706211 AAATTGAAAGGGTTTTTGGTGTTGTAGATT-TTGCCTACGCCCAGCTCTACCAGTAGCCG 8706269
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|||| || | || ||||| | |||||| ||| ||||||| ||||| | || ||
Sbjct 8706270 GTCCGCCACAAATTCGATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAATT-CA 8706328
Query 129907 TGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
||| | ||||| || |||| ||| ||||||||||||||| || || | || ||
Sbjct 8706329 CGGGCAAGGCGTCGGTGAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAATCTCGA 8706388
Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCC 130024
||| || || | | | | || | | || || ||| | ||| || || ||
Sbjct 8706389 TGATGCGCT-CGCGACGTGGTTTCTGGACGAGGTGCTGGAACATAAGCACAGCGAAGTCG 8706447
Query 130025 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 130084
||| ||||| ||||| | |||||| || || || |||||| |||||| ||||| | |
Sbjct 8706448 CAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCGGGCATCAAA 8706507
Query 130085 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144
|| ||||||||||||||||| || | ||| ||| |||||| || ||||||||
Sbjct 8706508 CCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATACCCTCCACG 8706567
Query 130145 CACGCGAACGCAAAGAGACGCTCAGCAAAG 130174
|| || || | || ||||| |||||
Sbjct 8706568 GCAGCAAATGCGATGATGCGCTCCCCAAAG 8706597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618328914180440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |