Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq13746 203 4e-47 seq13747 98.7 1e-15 >seq13746 Length=16180835 Score = 203 bits (224), Expect = 4e-47 Identities = 677/1046 (65%), Gaps = 18/1046 (2%) Strand=Plus/Minus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| | ||||||||||| ||||| |||||||| |||||||| ||| ||| | |||||| Sbjct 14159992 ACATGCTTATGCGCGTGGCAATCGGAATTCATGGAGAAGACATCGATGCTGCCGTGGAGA 14159933 Query 104289 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 104348 | ||| || | ||||| | || |||| |||||| | ||||| || || |||| Sbjct 14159932 CGTACAACTTGCTGTCCGAGCGTTATTTCACTCACGCTTCGCCAACACTTTTTGCCGCTG 14159873 Query 104349 GTACACCAA--GACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406 ||| || | ||||| |||| || ||||| | ||| | | ||||| || Sbjct 14159872 C--CACGAATCGTCCCCAGCTGTCGTCCTGTTTCCTCCTGACCATGACTGCCGACTCCAT 14159815 Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466 | | ||||||| | | || | | || || ||||| |||| ||||| ||||| Sbjct 14159814 CGAGGGTATCTTCAAATCGGTTGAGCAATGCGCCATGATCTCCAAGTCTGCTGGTGGTAT 14159755 Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTCGGGGGACAAATGGTC 104525 ||| | || ||||| | | || || | |||| ||| | || || ||||| Sbjct 14159754 TGGTCTTAACGTCCATTGCATTCGTGCAAAGGGTACCTCG-ATTTGCGGAACGAATGGCA 14159696 Query 104526 AATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATC 104585 ||| |||| | |||| ||||| | || |||||| | ||||| ||||| ||| Sbjct 14159695 CATCCAATGGCCTGGTTCCTATGCTGAGAGTCTTTAACAACGTGGCGCGGTATGTGGATC 14159636 Query 104586 AAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATA 104642 | | ||| | || |||| | | || | ||||| ||||| ||||| ||||| Sbjct 14159635 AGGGTGGTGGCAAGCGGCCGGGAGCCTTTGCCATTTATCTGGAGCCCTGGCATTCGGATG 14159576 Query 104643 TCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG---CCGCG 104699 | | ||||| || || | | || | || | |||| | || | ||||| Sbjct 14159575 TATTTGAGTTTCTGGACCT---TAAGAAGAATACTGGCAAGGAAGAGCATCGAGCCCGCG 14159519 Query 104700 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 104759 || | |||| || || ||||| ||||||||||||||||| |||| |||| | || Sbjct 14159518 ATTTGTTCTATGCCCTGTGGATACCAGATCTCTTCATGAAACGAGTGGAGGCCAATGAGG 14159459 Query 104760 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGT 104819 | ||||| | | ||||| | || ||||| ||| |||| ||| || |||| Sbjct 14159458 ACTGGTCGTTAATGTGTCCCCATAAATGCCCTGGCCTCCATGATGTGTGGGGCGATGAGT 14159399 Query 104820 TTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTG 104879 ||||| || || || ||||| | || || || || | | || ||| ||| Sbjct 14159398 TTGAAAAACTCTATGTGAAATACGAACAGGAGGGACGCGCCAATCGAACTGTGAAAGCAC 14159339 Query 104880 CCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTT 104939 ||||| ||||| | |||| ||| |||||||| | || |||||||| | Sbjct 14159338 AGTCCTTGTGGTTTGCTATCATTGAGTCGCAAGTGGAGACTGGAAATCCTTACATGCTGT 14159279 Query 104940 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 104999 ||| |||||||| |||| |||||| || ||| ||||| |||| || ||| | || Sbjct 14159278 TCAAGGACGCCTGCAACCGAAAGAGCAACCAACAGAATGTGGGCACCATTAAGTGCAGCA 14159219 Query 105000 ATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059 |||| || || ||||| | || | | | || |||| || || || || | | Sbjct 14159218 ATCTGTGCACGGAAATTGTTGAGTATTCTTCACCTGACGAGATTGCAGTTTGCAATTTGG 14159159 Query 105060 CATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAAC 105119 | || ||||||||| || || |||| ||| ||| ||||||| ||| | |||| | Sbjct 14159158 CCTCCATCGCTCTCAACATGTTTGTGACTCCCGAG---AAGACATATGACTTCAAAAAGC 14159102 Query 105120 TCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTT 105179 | | || || || || || || ||| |||||| || | | || |||| || |||| Sbjct 14159101 TAAAGGAGGTCACAAAGACGGTGGCCAGAAACCTCAATAAGATAATAGATATCAACTTTT 14159042 Query 105180 ACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTC 105239 | || | | || || || |||||||| || ||||| || || ||||||||| Sbjct 14159041 ATCCGCTGCCGGAGGCCAAGAAGTCCAATATGAGGCATCGTCCTATCGGAATCGGTGTTC 14158982 Query 105240 AGGGTCTCGCGGATGTATTCATTCTT 105265 |||| || || || | | |||||| Sbjct 14158981 AGGGACTGGCTGACGCGCTGATTCTT 14158956 >seq13747 Length=19884421 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 94753 AAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTC 94812 || || ||||||||| || ||| || | | ||||| ||||| ||||| || Sbjct 8706641 AAGGCAGATTGGGCTCTGGCCTGGATTTCTTCGAAGTCAGCCAACTTTGGGGAGCGCATC 8706582 Query 94813 TTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGG 94872 |||||||||| || |||||||| |||||| || ||| | |||| | ||| Sbjct 8706581 ATCGCATTTGCTGCCGTGGAGGGTATATTCTTCAGCGGCAGCTTTGCCTCTATCTTCTGG 8706522 Query 94873 CTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGAC 94932 | |||||||||||| | ||||| ||||| ||||||||||||||||||||| | ||| Sbjct 8706521 TTGAAGAAGCGAGGTTTGATGCCCGGTCTGACCTTCTCCAACGAGCTTATCTCCAGGGAC 8706462 Query 94933 GAGGGACTCCAC 94944 || || || ||| Sbjct 8706461 GAAGGTCTGCAC 8706450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583160559340760