Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq13746 95.1 9e-15 >seq13746 Length=16180835 Score = 95.1 bits (104), Expect = 9e-15 Identities = 364/558 (65%), Gaps = 23/558 (4%) Strand=Plus/Plus Query 111574 TCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAATTCAAAGTCATCAGCAAC-AAA 111632 ||||||||||| |||| || | |||| | | ||||||||| || | | | ||| Sbjct 795483 TCCATCTTTATCTTTGGATAGGGGTTGTAATCGACAATTTCAAAGTCCTC-GTAGCGAAA 795541 Query 111633 ATCGTCAATG-CAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTC 111691 ||| |||||| | ||| || || ||||| |||||| || ||||| |||| | Sbjct 795542 ATCTTCAATGTCCTGCACCTGG-CGCTTAATAACTAGTTTGGGGAAGGGCCGCGGCTCGC 795600 Query 111692 GGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATAC 111751 | ||| || || | |||| | |||||||| || ||||||| ||||| ||| Sbjct 795601 GTTCAAGTTGCTCCTGAAGTGGCTCCACGTGATTTAGGTATACATGCGTGTCTCCCATAG 795660 Query 111752 AATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGAC 111811 || | || || | ||||| | |||||||| || || ||||| || || | | Sbjct 795661 TGTGTACGAAGTCACCAGGCTTTAGACCAGTGACATGGGCGATCATATAGGTCAACAAGG 795720 Query 111812 TGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCT 111871 || |||||||| || || ||||| |||||||| || | || |||||| |||| Sbjct 795721 CATAGGAGGCAATGTTGAAGGGTACACCCAGGCCCATGTCGGCGCTTCGTTGATACAGCT 795780 Query 111872 GACATGATAGTTTA------TTTTGTGACACATAAAATTGA-CAAAGTACATGACAAGGA 111924 | || || |||| | || || |||||||| ||| | ||| | || || ||| Sbjct 795781 GGCAGGAGAGTTCGCCGCGCTCCTGAGAGACATAAAACTGAGCCAAGCAG-TGGCACGGA 795839 Query 111925 GGCAATGCCA----TCCCATTCATAAAGGGTCCCCATGCACACATGATCATCCTTCT-GC 111979 |||||||||| | || | ||| | ||| || ||||||| |||| ||| | Sbjct 795840 GGCAATGCCATTTTTGGAATGTCCAGAGGAT-TCCACGCCGACATGATGATCCGTCTATC 795898 Query 111980 TGTAGCGATTATGTTCAATGTCGTGT--ATGACATTCAAGAGCTGGTCTATCCCTTTACC 112037 | || ||| | ||| | |||||| ||||||| | || || || || || || || Sbjct 795899 CGAAG-GAT--TCTTCTTTATCGTGTCAATGACATGCTTTAGTTGATCGATACCCTTTCC 795955 Query 112038 AGTATAATCCGCCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTGGAATCCATA 112097 | || || | | ||| ||| ||| || ||| |||| | ||||||||| || || Sbjct 795956 ACGGTAGTCATCGTCACAGGTAGTATATTCGGCGCCAAAGTGCCGCCATTGGAAACCGTA 796015 Query 112098 AATAGGCCCCAGATCTCC 112115 | || |||| ||||| Sbjct 796016 CACCGGGCCCAAGTCTCC 796033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391879923268087