Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq13746 145 8e-30 seq13747 98.7 1e-15 >seq13746 Length=16180835 Score = 145 bits (160), Expect = 8e-30 Identities = 560/870 (64%), Gaps = 20/870 (2%) Strand=Plus/Plus Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 || |||| ||||| || || ||||||| || |||| ||| | ||||| |||||| Sbjct 14159155 GAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAAGAATACTCAACAATTTCCGTGCAC 14159214 Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 | ||| |||| |||||||| | |||| ||||||||||| ||| ||||||||| Sbjct 14159215 AGATTGCTGCACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGTCC 14159274 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTG--ACTCT-TGAGAACGCCGTCCCAG 79233 ||| | |||||| || | || ||||| || || |||| ||| | | ||| Sbjct 14159275 TTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAA---CCAC 14159331 Query 79234 ATGTCCCGGGCCCGGACAACCTTC--TTGTACCGACCCTGTGCGACGTACGTCCGGTACA 79291 | | | | || ||| ||| ||| || |||| |||| || || | Sbjct 14159332 AAGGACTGTGCTTTCACAG--TTCGATTGGCGCGTCCCTCCTGTTCGTATTTCACATAGA 14159389 Query 79292 ACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCA 79351 | | || | || || | ||||| | ||||| ||||| | || || ||||| | Sbjct 14159390 GTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAGGGCATTTATGGGGACACATTA 14159449 Query 79352 GGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCG 79411 ||||||||| | ||| || | ||||||||| || || ||||||||||| Sbjct 14159450 ACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAGGGCAT 14159509 Query 79412 TGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGT 79471 ||| | |||||| || ||| || | ||| ||| || || ||||| | Sbjct 14159510 AGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTATTCTTCTTAAGGTCCAGAAACT 14159569 Query 79472 CCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGC 79531 | | | || | ||||| ||||||||||| ||||| || | ||| |||||||| | Sbjct 14159570 CAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGCCAC 14159629 Query 79532 CGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGT 79591 | ||||| | || ||||| ||| |||||| || |||| ||||| || || | ||| | Sbjct 14159630 CACCCTGATCCACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGCCAT 14159689 Query 79592 CGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGA 79651 || ||| ||||| ||| || ||||| | || |||||| | || | Sbjct 14159690 TGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTTTGCACGAATGCAATGGACGTTAA 14159749 Query 79652 TTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGC 79711 || || || || | |||||||||| ||||| | || | || | | |||| | Sbjct 14159750 GACCAATACCACCAGCAGACTTGGAGATCATGGCGCATTGCTCAACCGATTTGAAGATAC 14159809 Query 79712 CCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCG 79771 ||||||| |||||| | |||| | | ||||| ||| ||||| ||| || |||| Sbjct 14159810 CCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAAACAGGACGACAGCTGGGGACGATTCG 14159869 Query 79772 TACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTG-AAGAACTTTTGGCTCATCAGATCG 79830 | | ||| || || || |||| ||||| ||| || ||| | || || || | | Sbjct 14159870 TGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGAGTGAAATAACGCTCGG-ACAGCAAGTTG 14159928 Query 79831 TACGTCTCCTTGACGCGCGG----GAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 ||||||||| ||| || | || ||| || || || || |||| || |||||||| Sbjct 14159929 TACGTCTCC---ACG-GCAGCATCGATGTCTTCTCCATGAATTCCGATTGCCACGCGCAT 14159984 Query 79887 GAAGAGGTACTGGGGCGTCTCGCCGACATT 79916 | | || |||||| |||| |||| || Sbjct 14159985 AAGCATGTGTTGGGGCCGCTCGGCGACTTT 14160014 >seq13747 Length=19884421 Score = 98.7 bits (108), Expect = 1e-15 Identities = 348/534 (65%), Gaps = 11/534 (2%) Strand=Plus/Minus Query 59892 CTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAG 59951 |||||| |||||| |||||| || || || || | || ||||| ||||| || Sbjct 8706680 CTGTTCAATGCCATTGAGACGATGCCTGCGGTGAAGCGCAAGGCAGATTGGGCTCTGGCC 8706621 Query 59952 TGGATGAGTCCTGGAG-CATCA---TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGA 60007 ||||| | | | || || | |||| | || |||| || ||||| |||||| Sbjct 8706620 TGGATTTCTTC-GAAGTCAGCCAACTTTGGGGAGCGCATCATCGCATTTGCTGCCGTGGA 8706562 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 || || |||||| ||| || |||| |||||| | || ||||| || | || Sbjct 8706561 GGGTATATTCTTCAGCGGCAGCTTTGCCTCTATCTTCTGGTTGAAGAAGCGAGGTTTGAT 8706502 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTT 60127 ||| || |||| |||||||||||||| || ||| ||||||| || || || || || Sbjct 8706501 GCCCGGTCTGACCTTCTCCAACGAGCTTATCTCCAGGGACGAAGGTCTGCACTGCGACTT 8706442 Query 60128 TGCAGTGACGCTCTATTCA-CACCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAGA 60186 || ||| | | | || ||||| | | ||| | | | || || | ||| Sbjct 8706441 CGCTGTGCTTATGT-TCCAGCACCTCGTCCAGAAACCACGTCGCGAGCGCATCATCGAGA 8706383 Query 60187 TTGTTCAGTGGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTT--CCATGCAA 60244 || | | ||| || | ||| |||||| |||| || || ||| || || || Sbjct 8706382 TTATCCGCGATGCTGTGGACATTGAGCAGGAGTTCCTCACCGACGC-CTTGCCCGTG-AA 8706325 Query 60245 ACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCT 60304 | || || ||| || | ||| |||| ||||| | ||||| |||||||| || Sbjct 8706324 TTTGATCGGCATGAACTGCGACTTGATGTCGCAATACATCGAATTTGTGGCGGACCGGCT 8706265 Query 60305 CATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGA 60364 ||| || | || | ||| ||| ||| | || ||||||||| | | ||||| Sbjct 8706264 ACTGGTAGAGCTGGGCGTAGGCAAAATCTACAACACCAAAAACCCTTTCAATTTCATGGA 8706205 Query 60365 GACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 || |||||| |||| |||||||||||||||||||| ||| ||| || || || Sbjct 8706204 GATGATCTCGCTGGACGGGAAGACCAACTTCTTTGAAAAGAAGGTGGGAGAGTA 8706151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548430529156560