Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_028898.1
Length=35764
Score E
Sequences producing significant alignments: (Bits) Value
seq5045 183 7e-42
seq3172 183 7e-42
seq1863 183 7e-42
seq868 183 7e-42
seq6530 179 8e-41
seq3415 140 7e-29
seq13086 136 9e-28
seq3521 136 9e-28
>seq5045
Length=1327
Score = 183 bits (202), Expect = 7e-42
Identities = 293/418 (70%), Gaps = 2/418 (0%)
Strand=Plus/Minus
Query 24615 TAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGT 24674
|| |||||||| ||||| | | |||| | || | | || ||| |||| |||| |
Sbjct 1082 TAGATTTTCTTTCTAAAGATGATATTGTAACACTCATCTTGCATGGTTCTATGAAACCTT 1023
Query 24675 TCGCAGATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTT 24734
|| || ||||| |||||||| ||| || | || ||| || || || || | | |
Sbjct 1022 TCACATATGCCATTAGTCTGTGGAGAGTTGGCTTTAGTTCTAGAATGATCGATGTTTTCT 963
Query 24735 ATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGG 24794
|| | |||||||||| |||| |||||||||| ||||||||| || || | || |
Sbjct 962 ATGCCCAAATAAAGCTGATAAGCGTGATTTTCGGGCTTGCCACAGTACTCCGTACCCCTA 903
Query 24795 TCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATC 24853
|||||||| |||||||| | || || | ||| ||||| |||| | ||| ||||
Sbjct 902 TCAGTTAAAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATC 844
Query 24854 ATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCAC 24913
|| || | ||| ||||| | ||||| || | || |||||||| | | || ||
Sbjct 843 GTTGAGAAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAAC 784
Query 24914 TTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCC 24973
| | |||||||||| ||| ||||| |||||||| || || | ||||||| |||||
Sbjct 783 TCTGGAATAAGTATCAACAAAAGTTTGCTGATAAATGCGCCCTATACCTTTGATATTGCC 724
Query 24974 CACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031
|||||| | |||||||| || || | ||| || || ||| ||| ||||||||||||
Sbjct 723 CACATAATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACCA 666
>seq3172
Length=1171
Score = 183 bits (202), Expect = 7e-42
Identities = 293/418 (70%), Gaps = 2/418 (0%)
Strand=Plus/Plus
Query 24615 TAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGT 24674
|| |||||||| ||||| | | |||| | || | | || ||| |||| |||| |
Sbjct 243 TAGATTTTCTTTCTAAAGATGATATTGTAACACTCATCTTGCATGGTTCTATGAAACCTT 302
Query 24675 TCGCAGATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTT 24734
|| || ||||| |||||||| ||| || | || ||| || || || || | | |
Sbjct 303 TCACATATGCCATTAGTCTGTGGAGAGTTGGCTTTAGTTCTAGAATGATCGATGTTTTCT 362
Query 24735 ATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGG 24794
|| | |||||||||| |||| |||||||||| ||||||||| || || | || |
Sbjct 363 ATGCCCAAATAAAGCTGATAAGCGTGATTTTCGGGCTTGCCACAGTACTCCGTACCCCTA 422
Query 24795 TCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATC 24853
|||||||| |||||||| | || || | ||| ||||| |||| | ||| ||||
Sbjct 423 TCAGTTAAAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATC 481
Query 24854 ATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCAC 24913
|| || | ||| ||||| | ||||| || | || |||||||| | | || ||
Sbjct 482 GTTGAGAAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAAC 541
Query 24914 TTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCC 24973
| | |||||||||| ||| ||||| |||||||| || || | ||||||| |||||
Sbjct 542 TCTGGAATAAGTATCAACAAAAGTTTGCTGATAAATGCGCCCTATACCTTTGATATTGCC 601
Query 24974 CACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031
|||||| | |||||||| || || | ||| || || ||| ||| ||||||||||||
Sbjct 602 CACATAATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACCA 659
>seq1863
Length=1071
Score = 183 bits (202), Expect = 7e-42
Identities = 293/418 (70%), Gaps = 2/418 (0%)
Strand=Plus/Minus
Query 24615 TAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGT 24674
|| |||||||| ||||| | | |||| | || | | || ||| |||| |||| |
Sbjct 829 TAGATTTTCTTTCTAAAGATGATATTGTAACACTCATCTTGCATGGTTCTATGAAACCTT 770
Query 24675 TCGCAGATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTT 24734
|| || ||||| |||||||| ||| || | || ||| || || || || | | |
Sbjct 769 TCACATATGCCATTAGTCTGTGGAGAGTTGGCTTTAGTTCTAGAATGATCGATGTTTTCT 710
Query 24735 ATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGG 24794
|| | |||||||||| |||| |||||||||| ||||||||| || || | || |
Sbjct 709 ATGCCCAAATAAAGCTGATAAGCGTGATTTTCGGGCTTGCCACAGTACTCCGTACCCCTA 650
Query 24795 TCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATC 24853
|||||||| |||||||| | || || | ||| ||||| |||| | ||| ||||
Sbjct 649 TCAGTTAAAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATC 591
Query 24854 ATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCAC 24913
|| || | ||| ||||| | ||||| || | || |||||||| | | || ||
Sbjct 590 GTTGAGAAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAAC 531
Query 24914 TTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCC 24973
| | |||||||||| ||| ||||| |||||||| || || | ||||||| |||||
Sbjct 530 TCTGGAATAAGTATCAACAAAAGTTTGCTGATAAATGCGCCCTATACCTTTGATATTGCC 471
Query 24974 CACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031
|||||| | |||||||| || || | ||| || || ||| ||| ||||||||||||
Sbjct 470 CACATAATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACCA 413
>seq868
Length=971
Score = 183 bits (202), Expect = 7e-42
Identities = 293/418 (70%), Gaps = 2/418 (0%)
Strand=Plus/Plus
Query 24615 TAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGT 24674
|| |||||||| ||||| | | |||| | || | | || ||| |||| |||| |
Sbjct 184 TAGATTTTCTTTCTAAAGATGATATTGTAACACTCATCTTGCATGGTTCTATGAAACCTT 243
Query 24675 TCGCAGATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTT 24734
|| || ||||| |||||||| ||| || | || ||| || || || || | | |
Sbjct 244 TCACATATGCCATTAGTCTGTGGAGAGTTGGCTTTAGTTCTAGAATGATCGATGTTTTCT 303
Query 24735 ATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGG 24794
|| | |||||||||| |||| |||||||||| ||||||||| || || | || |
Sbjct 304 ATGCCCAAATAAAGCTGATAAGCGTGATTTTCGGGCTTGCCACAGTACTCCGTACCCCTA 363
Query 24795 TCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATC 24853
|||||||| |||||||| | || || | ||| ||||| |||| | ||| ||||
Sbjct 364 TCAGTTAAAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATC 422
Query 24854 ATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCAC 24913
|| || | ||| ||||| | ||||| || | || |||||||| | | || ||
Sbjct 423 GTTGAGAAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAAC 482
Query 24914 TTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCC 24973
| | |||||||||| ||| ||||| |||||||| || || | ||||||| |||||
Sbjct 483 TCTGGAATAAGTATCAACAAAAGTTTGCTGATAAATGCGCCCTATACCTTTGATATTGCC 542
Query 24974 CACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031
|||||| | |||||||| || || | ||| || || ||| ||| ||||||||||||
Sbjct 543 CACATAATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACCA 600
>seq6530
Length=1475
Score = 179 bits (198), Expect = 8e-41
Identities = 267/376 (71%), Gaps = 2/376 (1%)
Strand=Plus/Plus
Query 24657 ATTGTTTTATGGAACCGTTCGCAGATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTA 24716
|| ||| |||| |||| ||| || ||||| |||||||| ||| || | || ||| ||
Sbjct 338 ATGGTTCTATGAAACCTTTCTCATATGCCATTAGTCTGTGGAGAGTTGGCTTTAGTTCTA 397
Query 24717 CTGTGTTCAATATCATTTATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCA 24776
|| || || | | ||| | |||||||||| |||| |||||||||| |||||||
Sbjct 398 GAATGATCGATGTTTTCTATGCCCAAATAAAGCTGATAAGCGTGATTTTCGGGCTTGCCA 457
Query 24777 CAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT-TCAAA 24835
|| || || | || | |||||||| |||||||| | || || | ||| |||||
Sbjct 458 CAGTACTCCGTACCCCTATCAGTTAAAATGCGTAATAATGG-AATTTTCTGCTCATCAAA 516
Query 24836 GTATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATA 24895
|||| | ||| |||| || || | ||| ||||| | ||||| || | || ||
Sbjct 517 AAATGGAATAACTCTATCGTTGAGAAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTA 576
Query 24896 AAGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACC 24955
|||||| | | || ||| | |||||||||| ||| ||||| |||||||| || ||
Sbjct 577 AAGTTTAACCATTGCAACTCTGGAATAAGTATCAACAAAAGTTTGCTGATAAATGCGCCC 636
Query 24956 CACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGC 25015
| ||||||| ||||||||||| | |||||||| || || | ||| || || |||
Sbjct 637 TATACCTTTGATATTGCCCACATAATAGGTATCTTGAGAACCCAAATAACCTGGATGTTG 696
Query 25016 CGTTTCAATTTCACCA 25031
||| ||||||||||||
Sbjct 697 CGTCTCAATTTCACCA 712
>seq3415
Length=1189
Score = 140 bits (154), Expect = 7e-29
Identities = 201/281 (72%), Gaps = 2/281 (1%)
Strand=Plus/Plus
Query 24752 ATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAA 24811
|||| |||||||||| ||||||||| || || | || | |||||||| ||||||||
Sbjct 1 ATAAGCGTGATTTTCGGGCTTGCCACAGTACTCCGTACCCCTATCAGTTAAAATGCGTAA 60
Query 24812 CATCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAG 24870
| || || | ||| ||||| |||| | ||| |||| || || | ||| ||||
Sbjct 61 TAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATCGTTGAGAAGATCTGCAG 119
Query 24871 CACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTACTGTAAGTATCAA 24930
| | ||||| || | || |||||||| | | || ||| | ||||||||||
Sbjct 120 CTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAACTCTGGAATAAGTATCAA 179
Query 24931 TAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTT 24990
||| ||||| |||||||| || || | ||||||| ||||||||||| | |||||||
Sbjct 180 CAAAAGTTTGCTGATAAATGCGCCCTATACCTTTGATATTGCCCACATAATAGGTATCTT 239
Query 24991 GTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031
| || || | ||| || || ||| ||| ||||||||||||
Sbjct 240 GAGAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACCA 280
>seq13086
Length=11057
Score = 136 bits (150), Expect = 9e-28
Identities = 199/279 (71%), Gaps = 2/279 (1%)
Strand=Plus/Minus
Query 24754 AATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACA 24813
|| |||||||||| ||||||||| || || | || | |||||||| |||||||| |
Sbjct 984 AAGCGTGATTTTCGGGCTTGCCACAGTACTCCGTACCCCTATCAGTTAAAATGCGTAATA 925
Query 24814 TCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAGCA 24872
|| || | ||| ||||| |||| | ||| |||| || || | ||| |||||
Sbjct 924 ATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATCGTTGAGAAGATCTGCAGCT 866
Query 24873 CTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTACTGTAAGTATCAATA 24932
| ||||| || | || |||||||| | | || ||| | |||||||||| |
Sbjct 865 GTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAACTCTGGAATAAGTATCAACA 806
Query 24933 AACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGT 24992
|| ||||| |||||||| || || | ||||||| ||||||||||| | ||||||||
Sbjct 805 AAAGTTTGCTGATAAATGCGCCCTATACCTTTGATATTGCCCACATAATAGGTATCTTGA 746
Query 24993 GAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031
|| || | ||| || || ||| ||| ||||||||||||
Sbjct 745 GAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACCA 707
>seq3521
Length=1198
Score = 136 bits (150), Expect = 9e-28
Identities = 199/279 (71%), Gaps = 2/279 (1%)
Strand=Plus/Plus
Query 24754 AATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACA 24813
|| |||||||||| ||||||||| || || | || | |||||||| |||||||| |
Sbjct 409 AAGCGTGATTTTCGGGCTTGCCACAGTACTCCGTACCCCTATCAGTTAAAATGCGTAATA 468
Query 24814 TCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAGCA 24872
|| || | ||| ||||| |||| | ||| |||| || || | ||| |||||
Sbjct 469 ATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATCGTTGAGAAGATCTGCAGCT 527
Query 24873 CTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTACTGTAAGTATCAATA 24932
| ||||| || | || |||||||| | | || ||| | |||||||||| |
Sbjct 528 GTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAACTCTGGAATAAGTATCAACA 587
Query 24933 AACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGT 24992
|| ||||| |||||||| || || | ||||||| ||||||||||| | ||||||||
Sbjct 588 AAAGTTTGCTGATAAATGCGCCCTATACCTTTGATATTGCCCACATAATAGGTATCTTGA 647
Query 24993 GAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031
|| || | ||| || || ||| ||| ||||||||||||
Sbjct 648 GAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACCA 686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114304534522588
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