Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq13746 123 2e-23 >seq13746 Length=16180835 Score = 123 bits (136), Expect = 2e-23 Identities = 299/453 (66%), Gaps = 6/453 (1%) Strand=Plus/Plus Query 6505 GGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTA 6564 |||||| || || ||||| |||| || || | | || |||| | ||| || ||||| Sbjct 795581 GGGGAAGGGCCGCGGCTCGCGTTCAAGTTGCTCCTGAAGTGGCTCCACGTGATTTAGGTA 795640 Query 6565 GATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGC 6624 | ||||| || |||| || || || | || ||||| | || |||||| || Sbjct 795641 TACATGCGTGTCTCCCATAGTGTGTACGAAGTCACCAGGCTTTAGACCAGTGACATGGGC 795700 Query 6625 GATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTC 6684 |||||| || || | || || || ||||||||||| || || || | |||||||| Sbjct 795701 GATCATATAGGTCAACAAGGCATAGGAGGCAATGTTGAAGGGTACACCCAGGCCCATGTC 795760 Query 6685 TCCCGATCGTTGATAGAGCTGGCAGGACAGCTC------CCCATTCGCGACGTAGAATTG 6738 | ||||||||| ||||||||||| || || | | | | ||| || || || Sbjct 795761 GGCGCTTCGTTGATACAGCTGGCAGGAGAGTTCGCCGCGCTCCTGAGAGACATAAAACTG 795820 Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCA 6798 | | ||||||||| || | ||||| || | ||| || |||||||| | Sbjct 795821 AGCCAAGCAGTGGCACGGAGGCAATGCCATTTTTGGAATGTCCAGAGGATTCCACGCCGA 795880 Query 6799 CATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTG 6858 ||| | ||||| ||| || ||| ||| ||| | ||||| || || | || || || Sbjct 795881 CATGATGATCCGTCTATCCGAAGGATTCTTCTTTATCGTGTCAATGACATGCTTTAGTTG 795940 Query 6859 GTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCT 6918 || |||| ||| ||||| | || | ||| || || |||||||| | Sbjct 795941 ATCGATACCCTTTCCACGGTAGTCATCGTCACAGGTAGTATATTCGGCGCCAAAGTGCCG 796000 Query 6919 CCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 ||| ||||| ||||| |||||||||||||| || Sbjct 796001 CCATTGGAAACCGTACACCGGGCCCAAGTCTCC 796033 Score = 123 bits (136), Expect = 2e-23 Identities = 299/453 (66%), Gaps = 6/453 (1%) Strand=Plus/Minus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || |||||||||||||| ||||| ||||| ||| | |||||||| || || ||| Sbjct 796033 GGAGACTTGGGCCCGGTGTACGGTTTCCAATGGCGGCACTTTGGCGCCGAATATACTACC 795974 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTG 34513 | || | ||||| ||| |||| || || || || | || || ||||| | Sbjct 795973 TGTGACGATGACTACCGTGGAAAGGGTATCGATCAACTAAAGCATGTCATTGACACGATA 795914 Query 34514 AAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCT 34573 ||| ||| ||| || ||| ||||| | |||| |||||||| || ||| | || Sbjct 795913 AAGAAGAATCCTTCGGATAGACGGATCATCATGTCGGCGTGGAATCCTCTGGACATTCCA 795854 Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGG------ 34627 ||||| | || ||||||||| | | || || || ||| | | | | Sbjct 795853 AAAATGGCATTGCCTCCGTGCCACTGCTTGGCTCAGTTTTATGTCTCTCAGGAGCGCGGC 795794 Query 34628 GAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAAC 34687 || || ||||||||||| ||||||||| | |||||||| | || || || |||||| Sbjct 795793 GAACTCTCCTGCCAGCTGTATCAACGAAGCGCCGACATGGGCCTGGGTGTACCCTTCAAC 795734 Query 34688 ATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGG 34747 ||||| || || || | || || |||||||| |||||| || | ||||| Sbjct 795733 ATTGCCTCCTATGCCTTGTTGACCTATATGATCGCCCATGTCACTGGTCTAAAGCCTGGT 795674 Query 34748 GAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGG 34807 || | || || || |||| || ||||| | ||||| || ||| | |||| || | | Sbjct 795673 GACTTCGTACACACTATGGGAGACACGCATGTATACCTAAATCACGTGGAGCCACTTCAG 795614 Query 34808 ATCCAGCTGCAACGAGAGCCCCGACCGTTCCCC 34840 || || |||| ||||| || || |||||| Sbjct 795613 GAGCAACTTGAACGCGAGCCGCGGCCCTTCCCC 795581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448185360503280