Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq13745 102 7e-17
seq13748 89.7 4e-13
seq13746 82.4 7e-11
>seq13745
Length=6960332
Score = 102 bits (112), Expect = 7e-17
Identities = 163/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| | | ||| | |||||| || || || ||| || || || || || ||
Sbjct 842503 CATGCCTCCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 842562
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| || || ||| |||| || ||||| ||||| || || || ||||||||||| || |
Sbjct 842563 GGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 842622
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
||| | || ||| |||||| ||| || || | || | | |||||| | |||
Sbjct 842623 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGGAGGGCTC 842682
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
|| |||| ||||| | || || ||||| || || || || |||||||||||
Sbjct 842683 GACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCATCTT 842736
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| | | ||| | |||||| || || || ||| || || || || || ||
Sbjct 841591 CATGCCTCCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 841650
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| || || ||| |||| || ||||| ||||| || || || ||||||||||| || |
Sbjct 841651 GGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 841710
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
||| | || ||| |||||| ||| || || | || | | || ||| | |||
Sbjct 841711 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTC 841770
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || || ||||| || || || ||||| |||||
Sbjct 841771 GACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 841821
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| | | ||| | ||||| ||| || || ||| || || || || || ||
Sbjct 841819 CATGCCTCCGCGGAGGCGGAGCACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 841878
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| || || ||| |||| || ||||| || || || || || ||||||||||| || |
Sbjct 841879 GGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGG 841938
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
||| | || ||| |||||| ||| || || | || | | || ||| | |||
Sbjct 841939 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTC 841998
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| |||| || ||||| || || || ||||| |||||
Sbjct 841999 GACCTCCAGGGTGATGGTTTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842049
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| | | ||| | |||||| || || || ||| || || || || || ||
Sbjct 842047 CATGCCTCCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 842106
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| || || ||| |||| || ||||| ||||| || || || ||||||||||| || |
Sbjct 842107 GGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 842166
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
|| | || ||| |||||| ||| || || | || | | || ||| | |||
Sbjct 842167 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTC 842226
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || || ||||| || || || ||||| |||||
Sbjct 842227 GACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842277
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| | | || | |||||| || || || ||| || || || || || ||
Sbjct 842275 CATGCCTCCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 842334
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| || || ||| |||| || ||||| || || || || || ||||||||||| || |
Sbjct 842335 GGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGG 842394
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
||| | || ||| |||||| ||| || |||| || | | || ||| | |||
Sbjct 842395 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGGAGGGCTC 842454
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || || ||||| || || || ||||| |||||
Sbjct 842455 GACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842505
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| | | || | |||||| || || || ||| || || || || || ||
Sbjct 841363 CATGCCTCCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 841422
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| || || ||| |||| || ||||| ||||| || || || ||||||||||| || |
Sbjct 841423 GGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 841482
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
|| | || ||| |||||| ||| || || | || | | || ||| | |||
Sbjct 841483 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTC 841542
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || || ||||| || || || ||||| |||||
Sbjct 841543 GACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 841593
>seq13748
Length=23293914
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || ||| ||| || || || || || || | || || || | || ||
Sbjct 9537203 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 9537144
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| || || || || || | |||||||||||| | ||| | | ||| |||||| |
Sbjct 9537143 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 9537084
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| || ||||| || | | || ||| | |||||| |||| ||||| |||||
Sbjct 9537083 ATCTTGGCTTTGACGTTCTCAATGGTGTCGGAGGGCTCCACCTCCAGGGTGATGGTTTTT 9537024
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| || ||||| |||||
Sbjct 9537023 CCAGTCAAGGTTTTCACGAAGATCTGCAT 9536995
>seq13746
Length=16180835
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| ||| || || ||| || || || || || |||| ||| || || | || ||
Sbjct 2088076 CACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTC 2088017
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| || || || ||||||||||| || | || | || ||||||||||
Sbjct 2088016 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCCTCTTTGTCCTG 2087957
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
||| || || | || | | || || || ||| || || | ||||| | ||
Sbjct 2087956 GATCTTAGCCTTCACATTCTCGATGGTGTCCGACGGCTCGACCTCGAGGGTGATGGTCTT 2087897
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || ||||| || |||||||||||
Sbjct 2087896 GCCGGTGAGGGTTTTCACGAAGATTTGCAT 2087867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429473622788837
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |