Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq13746 116 3e-21 seq13748 82.4 5e-11 >seq13746 Length=16180835 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| |||||||| ||||||||||| || || |||||||| || || || | Sbjct 14254215 AAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCG 14254274 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| | ||| || ||| ||||||||||| | || |||||| Sbjct 14254275 TCGGATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGAT 14254334 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || || || ||||| || |||||||| | ||||| | || || Sbjct 14254335 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTAT 14254394 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| || || ||||| || || || || || Sbjct 14254395 AACATTCAGAAGGAGTCTACCTTGCACTTGGT 14254426 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||||||||| || || || ||||| ||||| || || | || Sbjct 2087867 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCGTCG 2087926 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || |||||||| || | || |||||||| Sbjct 2087927 GACACCATCGAGAATGTGAAGGC-TAAGATCCAGGACAAAGAGGGCATCCCTCCAGATCA 2087985 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || ||||| || | ||||| | ||| ||||| Sbjct 2087986 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTTTCCGACTACAA 2088045 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 2088046 CATCCAGAAGGAGTCGAC 2088063 >seq13748 Length=23293914 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || |||||| | || |||||||| ||||| || || || || || Sbjct 9536308 AAAATGCAGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCC 9536367 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | || | | || || ||| ||||| || || | || ||||| Sbjct 9536368 TCTGATACCATCGAGAACGTGAAGGCCAAGATTCAAGACAAGGAGGGAATCCCCCCAGAC 9536427 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||||| || || ||||| || || || || || | ||||| | || ||| Sbjct 9536428 CAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCGGACTAC 9536487 Query 23788 AACATACAAAAAGAGTCCAC 23807 || || || || |||||||| Sbjct 9536488 AATATCCAGAAGGAGTCCAC 9536507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337952961104492