Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq13748 82.4 6e-11 >seq13748 Length=23293914 Score = 82.4 bits (90), Expect = 6e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 103374 GACGTTGCCCAAATCGCCAACGTGTCTGACGAGCGCGTCGGGCGCGCCGTGCGTTTCGCC 103433 || ||||||||| ||||| | ||| | | || |||| ||||||||| | ||| Sbjct 5397262 GATGTTGCCCAAGTCGCCCAAGTGACGGTTCTCATCGCCGGGAGCGCCGTGCTCCTTGCC 5397321 Query 103434 GGTGGGATTAAAATGTTCGCCGGCCGACGTGCAGCCGTTGCTTGTGTCGCCAAACTCGTG 103493 | ||| || ||||| ||||| ||| ||||||||||| | |||| || |||||||| Sbjct 5397322 GTAGGGGTTGAAATGGGGGCCGGAGGACATGCAGCCGTTGGTGTTGTCTCCGAACTCGTG 5397381 Query 103494 CACGTGAAAACCGTGCAATCCTTTG 103518 ||| || || ||||||| || ||| Sbjct 5397382 CACATGGAAGCCGTGCAGACCCTTG 5397406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409592154803991