Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 131 1e-25
>seq13746
Length=16180835
Score = 131 bits (144), Expect = 1e-25
Identities = 307/460 (67%), Gaps = 10/460 (2%)
Strand=Plus/Plus
Query 27100 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCC 27159
||| |||| ||||| | ||||| | || || || || || || ||||||||||
Sbjct 795576 AGTTTGGGGAAGGGCCGCGGCTCGCGTTCAAGTTGCTCCTGAAGTGGCTCCACGTGATTT 795635
Query 27160 AGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 27219
||||| || || | |||||||| ||||| || || || || || | ||| || |||||
Sbjct 795636 AGGTATACATGCGTGTCTCCCATAGTGTGTACGAAGTCACCAGGCTTTAGACCAGTGACA 795695
Query 27220 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 27279
|| || ||||| || || | | | ||| ||| ||||| |||||||| || || |||
Sbjct 795696 TGGGCGATCATATAGGTCAACAAGGCATAGGAGGCAATGTTGAAGGGTACACCCAGGCCC 795755
Query 27280 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT-------ACGTA 27332
||||| | | || || ||||| || ||||| || || |||| || ||
Sbjct 795756 ATGTCGGCGCTTCGTTGATACAGCTGGCAGGAGAGTTCGCCG-CGCTCCTGAGAGACATA 795814
Query 27333 AAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCA 27392
||||||| | | |||||||||||| | ||||| | ||| || |||||
Sbjct 795815 AAACTGAGCCAAGCAGTGGCACGGAGGCAATGCCATTTTTGGAATGTCCAGAGGATTCCA 795874
Query 27393 GGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTG 27452
|| ||| |||||| || || || || || ||| | || ||| | | | | |
Sbjct 795875 CGCCGACATGATGATCCGTCTATCCGAAGGATTCTTCTTTATCGTGTCAATGACATGCTT 795934
Query 27453 CAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACTCTGCTCCGA 27511
|| ||||| | ||| | || |||||| | | || || || || || || || |
Sbjct 795935 TAGTTGATCGATACCCTTTCCACGGTAGTCATCGTCACAGGTA-GTATATTCGGCGCCAA 795993
Query 27512 AATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551
| |||| ||||||||| ||||||||||| |||| ||||||
Sbjct 795994 AGTGCCGCCATTGGAAACCGTACACCGGGCCCAAGTCTCC 796033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369445283179619
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |