Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq13746 547 9e-151 seq13747 132 7e-26 >seq13746 Length=16180835 Score = 547 bits (606), Expect = 9e-151 Identities = 1268/1884 (67%), Gaps = 48/1884 (3%) Strand=Plus/Plus Query 76770 TTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATA 76829 ||||| || | ||||||||||| | | || || ||||| || | |||||||| Sbjct 14158234 TTCTTGTCGACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATT 14158293 Query 76830 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889 || ||||| ||||| |||| ||||||||| ||| ||| || || ||| | Sbjct 14158294 CCGGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTT 14158353 Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949 || || || | ||| ||||| | ||||| || ||||| || || || || | |||||| Sbjct 14158354 GGCTCTGCCACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCG 14158413 Query 76950 GCCATTTTTATAATGGTC--TTT---TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTT 77004 |||||||| |||||| ||| |||| |||||||| | |||||| ||| | | Sbjct 14158414 GCCATTTT---AATGGTTGATTTCACTGAG--ATTTCCCATACTGTTTTGTAAA---GGT 14158465 Query 77005 TGATATCATCT---GGAA-GGTTTG--TATTTTGAATGGAACCACCATCTG-ATATAATT 77057 | | | | | |||| || || |||||||||| || || || ||| | || || Sbjct 14158466 CGCGAACCTTTTGGGGAATGGATTCAATATTTTGAATAGATCC-CCTGCTGGAGATTATC 14158524 Query 77058 GTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGA 77117 |||||| || ||||| | |||||| | | ||| || || | || || | |||| | Sbjct 14158525 TGATTCTTCATGTCATCGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGG 14158584 Query 77118 TTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGT 77177 ||||| | ||| || || || || | ||| | | || |||||||| | || || || Sbjct 14158585 TTAACCACTTGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGC 14158644 Query 77178 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACC 77237 || | || || ||||| |||| ||| |||||||| || || || ||||| || || ||| Sbjct 14158645 TCGAAGGACTCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACC 14158704 Query 77238 AATAAACTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 |||| ||||||| ||||| |||| |||| || || ||| ||||||| ||||| Sbjct 14158705 AATAGGGAGTTTCTGACTCCATGCTGTT-TGATAGACTCCTTCAGAGATTTCCAGTCCCA 14158763 Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356 ||| | | || |||||| | ||||| || |||||||| ||||| | Sbjct 14158764 GAGACCAGTCGGCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCT 14158823 Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 ||| | ||| |||||||||| ||| ||| ||| || ||||| ||||| || |||| || Sbjct 14158824 TCCTTCATAAGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGC 14158883 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGA-GATCTTGTGCTTCAATACTATCAA 77475 ||| | || |||||||| ||||||| | || | || | ||| || || || Sbjct 14158884 TCCAAAGTAGATTGTTTCAAAAATCTGTTGGTTCAAGAGGCT-TGCCTCCTCGCTTTCGT 14158942 Query 77476 ACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535 | |||||| | | |||||| | || || || | ||||||||| || || || ||||| | Sbjct 14158943 AGGGATAACGCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGAC 14159002 Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595 ||| ||| ||||||| | || || || || | |||||| | || || ||||| || | Sbjct 14159003 GATGCCTCATATTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCT 14159062 Query 77596 TATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAAT--CT 77653 ||||||| ||||| | || || || |||||||| || || ||| || || Sbjct 14159063 TATTGAGGTTTCTGGCCACCGTCTTTGTGACCTCCTTTAGCTTTTTGAAGTCATATGTCT 14159122 Query 77654 TCCATCTA-TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 || | | ||||||||||| | ||| || || || | ||| |||||||| | ||| | Sbjct 14159123 TCTCGGGAGTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGT 14159182 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 || | ||| | | || || || || ||||| || || || || ||||||| || Sbjct 14159183 CAGGTGAAGAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACAT 14159242 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 | ||||||||||||||| ||||| | |||||| | || || | ||| | || || | Sbjct 14159243 TCTGTTGGTTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCT 14159302 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACG-ACTCTAGCTTTTATCA--TAGATTTGT 77889 | | || || || || |||| ||| | | ||| | ||||| | || | |||| | Sbjct 14159303 CCACTTGCGACTCAATGATAGCAAACCACAAGGACTGT-GCTTTCA-CAGTTCGATTGG- 14159359 Query 77890 ATCGCCTCTCTCTT--TCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATC 77947 ||| || ||| | || |||| ||| || |||||| ||||| ||||| ||||| Sbjct 14159360 --CGCGTCCCTCCTGTTCGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATC 14159417 Query 77948 ATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCG 78007 || | |||||||||| || || ||||| || |||||||| ||| ||| ||||| Sbjct 14159418 ATGGAGGCCAGGGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCG 14159477 Query 78008 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 |||||| |||||||| |||||||| || ||| || | ||| |||| || ||| ||||| Sbjct 14159478 TTTCATGAAGAGATCTGGTATCCACAGGGCATAGAACAAATCGCGGGCTCGATGCTCTTC 14159537 Query 78068 ATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 78127 || || |||||||| ||||| || |||||||| | | ||| |||||||| || || || Sbjct 14159538 CTTGCCAGTATTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAG 14159597 Query 78128 ATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTT 78187 ||| || || | |||| || || || ||| |||||||| | ||| | || ||| Sbjct 14159598 ATAAATGGCAAAGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTT 14159657 Query 78188 ATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 ||| | ||||||| ||| |||| | || || ||||| ||||| ||||| |||| | Sbjct 14159658 GTTAAAGACTCTCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAATCGA 14159717 Query 78248 ACTTCCACTTGCGCGAATATTACTAATGGA----TATCCCTATTCCTCCTGCCATCTTAG 78303 | || |||| ||||| |||||| | || || || || || ||| | Sbjct 14159718 GGTACCCTTTGCACGAAT----GCAATGGACGTTAAGACCAATACCACCAGCAGACTTGG 14159773 Query 78304 ATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | || | ||||| | | | | | | |||||||||| || ||| | ||||| Sbjct 14159774 AGATCATGGCGCATTGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGG 14159833 Query 78364 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAG 78423 | || || |||||| |||| || || || || | || ||| | ||| || | Sbjct 14159834 TCAGGAGGAAACAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCG 14159893 Query 78424 ATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGT 78483 | || || || || | || || || | ||||| || || | || | || |||| Sbjct 14159894 AAGCGTGAGTGAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGT 14159953 Query 78484 CCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCT 78543 | | ||||||||| | || || ||||| | ||| || || || | || || || Sbjct 14159954 CTTCTCCATGAATTCCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTC-GGCGACT 14160012 Query 78544 TAT-TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 78602 | | ||||||||| | | ||| || |||| ||||||||| ||||| || || || Sbjct 14160013 TTTCCATTTATTTTAAGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTAATTATAA 14160072 Query 78603 GAAAAGTCTCTCTCGTAAATAATA 78626 |||||| | || ||||| ||| Sbjct 14160073 CCAAAGTCACGATCATAAATTATA 14160096 >seq13747 Length=19884421 Score = 132 bits (146), Expect = 7e-26 Identities = 288/427 (67%), Gaps = 7/427 (2%) Strand=Plus/Plus Query 48144 GCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCG 48203 || || || || || |||||||| || || || | ||||| || || || |||||| Sbjct 8706439 GCGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCG 8706498 Query 48204 GGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAATAT 48262 ||||| | || || || || | ||| || || | || |||| | || |||||||| Sbjct 8706499 GGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGC-AAAGCTGCCGCTGAAGAATAT 8706557 Query 48263 GCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTGTA 48318 || || ||||| ||||||||| | | | ||| || | ||| ||||| | | Sbjct 8706558 ACCCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTTGGCTGACTTCGAAG-AAA 8706616 Query 48319 TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 48378 |||| | |||||||| ||||| ||| || |||||| || || || ||||| | Sbjct 8706617 TCCAGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGA 8706676 Query 48379 AGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438 | || | | | | | |||| || ||||||||| || | | ||| ||||| | Sbjct 8706677 ACAGGTATTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATCT 8706736 Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCT 48498 | ||||| | ||||| || || || || || ||||| ||||| | ||| || |||| || Sbjct 8706737 CAGAGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCT 8706796 Query 48499 GTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAA 48558 | |||||| || || || || ||| ||||| || || |||||||| |||||||| Sbjct 8706797 GAACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCAA 8706856 Query 48559 AAAATGC 48565 | || || Sbjct 8706857 AGAAGGC 8706863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694549412483360