Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq4 100 3e-16
>seq4
Length=23952536
Score = 100 bits (110), Expect = 3e-16
Identities = 195/283 (69%), Gaps = 4/283 (1%)
Strand=Plus/Minus
Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTGTCGTGGAGTCCT 118995
||||| || || ||||| ||||||| | ||||||||||| || |||||| | ||
Sbjct 633374 TTCATATAGCGAATCTTACCAAATATCGCGCGCTCCTTCCAACCTTGGTCGTGAATCCCA 633315
Query 118996 GCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACTT 119054
| | | ||| | || || ||||| || || ||||| ||| || | ||| ||||||
Sbjct 633314 CCGATGGACCACATGCAACCAACGTAGCCATTCGGATCACGTCCATCCAGACT-GTACTT 633256
Query 119055 ATCGTTTAAGTAGATACAGACGCTTAA-CGCACTTTCCGGAGTCTTACTCCATTCCAGTA 119113
||||| || | || | | || || ||| |||||| || | |||| || | |
Sbjct 633255 GTCGTTCAATAATATGCT-ATACTCAAGCGCCTGTTCCGGCGTTTCGGTCCACTCTAAAA 633197
Query 119114 tttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAA 119173
| ||||| ||||| ||||| || | | ||||||||||||| || || || | || ||| |
Sbjct 633196 TCTTTTTGGCCCAATACATGCGCAGAAACCCGTGCATTTTGCCTTCCTTGACCAGCTGCA 633137
Query 119174 GTTGTGCGGTGTTCCATAGAGGATCGTGTGTACGGGCGTGTTC 119216
| || || | |||||| ||| |||| || || | ||| ||
Sbjct 633136 GCTGGGCCGAGTTCCACAGATCGTCGTAGGTGCGCGAGTGCTC 633094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511394084062960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |